RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PDCD1Q15116 288 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 GRK1Q15835 563 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 TAF9Q16594 264 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 MPV17LQ2QL34 196 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 C11orf91Q3C1V1 193 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 DCAF12L2Q5VW00 463 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 Q6P435 159 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 SFXN4Q6P4A7 337 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 BTNL3Q6UXE8 466 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 BTN2A1Q7KYR7 527 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 OR2W3Q7Z3T1 314 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 OR8H2Q8N162 312 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 OR4M2Q8NGB6 313 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 OR51D1Q8NGF3 324 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 CHST6Q9GZX3 395 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 NAA50Q9GZZ1 169 aaKnown RBP12.18□□□□□ -0.46
PNKP-221ENST00000627317 DAPK2Q9UIK4 370 aa12.18□□□□□ -0.46
PNKP-221ENST00000627317 POLR3KQ9Y2Y1 108 aaPredicted RBP12.18□□□□□ -0.46
PNKP-221ENST00000627317 PPIAL4CA0A0B4J2A2 164 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 IGHV2-70DA0A0C4DH43 119 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 TMEM14DPA8MWL7 114 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 SLC33A1O00400 549 aaPredicted RBP12.17□□□□□ -0.46
PNKP-221ENST00000627317 HSPB6O14558 160 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 IL1AP01583 271 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 SLC2A2P11168 524 aaPredicted RBP12.17□□□□□ -0.46
PNKP-221ENST00000627317 HNF1AP20823 631 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 GATA3P23771 443 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 OR3A1P47881 315 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 EDDM3AQ14507 147 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 PAN3Q58A45 887 aaKnown RBP12.17□□□□□ -0.46
PNKP-221ENST00000627317 C1orf229Q6ZS94 237 aaPredicted RBP12.17□□□□□ -0.46
PNKP-221ENST00000627317 GDPD3Q7L5L3 318 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 RAB40AQ8WXH6 277 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 Q96M66 194 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 NUDT16L1Q9BRJ7 211 aaKnown RBP12.17□□□□□ -0.46
PNKP-221ENST00000627317 PPA2Q9H2U2 334 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 LIN7BQ9HAP6 207 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 RPUSD1Q9UJJ7 312 aaKnown RBP12.17□□□□□ -0.46
PNKP-221ENST00000627317 ARHGAP32A7KAX9 2087 aa12.17□□□□□ -0.46
PNKP-221ENST00000627317 TRBV23-1A0A0A0MS06 115 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 A0A0B4J203 849 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 A0A1W2PQ09 198 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A10PA6NDY2 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A18PA6NE21 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A16PA6NEW6 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A20PA6NIJ5 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A8PA6NJQ4 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A7PA6NKC0 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A22PA8MWA6 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A12PA8MX19 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A5PA8MXJ8 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A23PA8MXZ1 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 MGST3O14880 152 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 PSPNO60542 156 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A15PP0C7V4 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A13PP0C7W8 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A14PP0C7W9 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM90A24PP0C7X0 464 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 LMO1P25800 156 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 EDDM3BP56851 147 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 RPS27AP62979 156 aaKnown RBP12.16□□□□□ -0.46
PNKP-221ENST00000627317 QRFPP83859 136 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 UNC119Q13432 240 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 CTF1Q16619 201 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 C2orf76Q3KRA6 126 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 ATAD3CQ5T2N8 411 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAHD2BQ6P2I3 314 aaPredicted RBP12.16□□□□□ -0.46
PNKP-221ENST00000627317 C17orf107Q6ZR85 190 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 CROCCP3Q8IVE0 287 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAM185AQ8N0U4 392 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 OR4S1Q8NGB4 309 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 NEK7Q8TDX7 302 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 RAB2BQ8WUD1 216 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 FAHD2AQ96GK7 314 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 DCTN5Q9BTE1 182 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 URM1Q9BTM9 101 aaKnown RBP12.16□□□□□ -0.46
PNKP-221ENST00000627317 IFT22Q9H7X7 185 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 SPACA1Q9HBV2 294 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 MMP26Q9NRE1 261 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 ANK2Q01484 3957 aa12.16□□□□□ -0.46
PNKP-221ENST00000627317 TRAV24A0A0B4J272 114 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 TMEM272A0A1B0GTI8 110 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 FUOMA2VDF0 154 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 H3BUI4 141 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 J3QLI3 93 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 AVPP01185 164 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 RPL31P62899 125 aaKnown RBP12.15□□□□□ -0.46
PNKP-221ENST00000627317 PAX2Q02962 417 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 ATXN7L3Q14CW9 347 aaPredicted RBP12.15□□□□□ -0.46
PNKP-221ENST00000627317 IDNKQ5T6J7 187 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 USP43Q70EL4 1123 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 SUMF2Q8NBJ7 301 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 OR4M1Q8NGD0 313 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 BCL7BQ9BQE9 202 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 MRI1Q9BV20 369 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 DPCDQ9BVM2 203 aaPredicted RBP12.15□□□□□ -0.46
PNKP-221ENST00000627317 ZNF581Q9P0T4 197 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 FBLN5Q9UBX5 448 aa12.15□□□□□ -0.46
PNKP-221ENST00000627317 INSIG2Q9Y5U4 225 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms