RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 DSCAML1Q8TD84 2053 aa20.37■□□□□ 0.85
VEGFA-229ENST00000621747 SLC33A1O00400 549 aaPredicted RBP20.36■□□□□ 0.85
VEGFA-229ENST00000621747 CHST1O43916 411 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 GLIPR1P48060 266 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 DYNLT3P51808 116 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 EFNB2P52799 333 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 OR2G6Q5TZ20 316 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 ELP2Q6IA86 826 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 DHRSXQ8N5I4 330 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 TNFAIP8L1Q8WVP5 186 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 NKX3-1Q99801 234 aaPredicted RBP20.36■□□□□ 0.85
VEGFA-229ENST00000621747 CHCHD3Q9NX63 227 aaKnown RBP20.36■□□□□ 0.85
VEGFA-229ENST00000621747 TAS2R4Q9NYW5 299 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 SIGLEC9Q9Y336 463 aa20.36■□□□□ 0.85
VEGFA-229ENST00000621747 PKD1L1Q8TDX9 2849 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 ODAMA1E959 279 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 MMP23AO75900 390 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 RAB13P51153 203 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 RCN1Q15293 331 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 KRBOX4Q5JUW0 171 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 XAF1Q6GPH4 301 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 HEPN1Q6WQI6 88 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 Q6ZTK2 550 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 RTN4RL2Q86UN3 420 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 OR51A2Q8NGJ7 313 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 TMEM106AQ96A25 262 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 FAM192AQ9GZU8 254 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 BABAM2Q9NXR7 383 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 HILPDAQ9Y5L2 63 aa20.35■□□□□ 0.85
VEGFA-229ENST00000621747 A6NDX4 124 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 F2RL2O00254 374 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 GABRPO00591 440 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 CDK2P24941 298 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 HTR1DP28221 377 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 PTGFRP43088 359 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 PPP3R1P63098 170 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 ADARB1P78563 741 aaKnown RBP20.34■□□□□ 0.85
VEGFA-229ENST00000621747 SLC34A1Q06495 639 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 HERPUD1Q15011 391 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 C2orf68Q2NKX9 166 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 PRAMEF5Q5TYX0 476 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 ABHD12Q8N2K0 398 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 SMIM19Q96E16 107 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 TMEM80Q96HE8 168 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 NR1H4Q96RI1 486 aaPredicted RBP20.34■□□□□ 0.85
VEGFA-229ENST00000621747 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.34■□□□□ 0.85
VEGFA-229ENST00000621747 ZNF281Q9Y2X9 895 aa20.34■□□□□ 0.85
VEGFA-229ENST00000621747 H0YJX3 145 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 OGG1O15527 345 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 WIPF1O43516 503 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 ALDOBP05062 364 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 IL13RA2Q14627 380 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 ATXN7L3Q14CW9 347 aaPredicted RBP20.33■□□□□ 0.85
VEGFA-229ENST00000621747 RSU1Q15404 277 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 OR4D6Q8NGJ1 314 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 OR52N1Q8NH53 320 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 ZNF596Q8TC21 504 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 COQ2Q96H96 371 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 ING3Q9NXR8 418 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 OR6C3Q9NZP0 311 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 HSPE1-MOB4S4R3N1 261 aa20.33■□□□□ 0.85
VEGFA-229ENST00000621747 CMYA5Q8N3K9 4069 aa20.32■□□□□ 0.84
VEGFA-229ENST00000621747 H3BUI4 141 aa20.32■□□□□ 0.84
VEGFA-229ENST00000621747 CCBE1Q6UXH8 406 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-229ENST00000621747 TMEM219Q86XT9 240 aa20.32■□□□□ 0.84
VEGFA-229ENST00000621747 KLHDC1Q8N7A1 406 aa20.32■□□□□ 0.84
VEGFA-229ENST00000621747 OR51T1Q8NGJ9 327 aa20.32■□□□□ 0.84
VEGFA-229ENST00000621747 OR4P4Q8NGL7 312 aa20.32■□□□□ 0.84
VEGFA-229ENST00000621747 TMEM138Q9NPI0 162 aa20.32■□□□□ 0.84
VEGFA-229ENST00000621747 CLEC2DQ9UHP7 191 aa20.32■□□□□ 0.84
VEGFA-229ENST00000621747 SIRT4Q9Y6E7 314 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-229ENST00000621747 ZNF729A6NN14 1252 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-229ENST00000621747 PAN3Q58A45 887 aaKnown RBP20.31■□□□□ 0.84
VEGFA-229ENST00000621747 ZNF702PQ9H963 129 aa20.31■□□□□ 0.84
VEGFA-229ENST00000621747 DPM3Q9P2X0 92 aa20.31■□□□□ 0.84
VEGFA-229ENST00000621747 MEGF11A6BM72 1044 aa20.3■□□□□ 0.84
VEGFA-229ENST00000621747 HSPB6O14558 160 aa20.3■□□□□ 0.84
VEGFA-229ENST00000621747 ARHGDIBP52566 201 aa20.3■□□□□ 0.84
VEGFA-229ENST00000621747 BDH1Q02338 343 aa20.3■□□□□ 0.84
VEGFA-229ENST00000621747 DDI2Q5TDH0 399 aa20.3■□□□□ 0.84
VEGFA-229ENST00000621747 C8orf59Q8N0T1 100 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-229ENST00000621747 Q8NFD4 153 aa20.3■□□□□ 0.84
VEGFA-229ENST00000621747 GGHQ92820 318 aa20.3■□□□□ 0.84
VEGFA-229ENST00000621747 PPIL3Q9H2H8 161 aaKnown RBP20.3■□□□□ 0.84
VEGFA-229ENST00000621747 FOXJ3Q9UPW0 622 aa20.3■□□□□ 0.84
VEGFA-229ENST00000621747 EFCAB10A6NFE3 127 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 TOR1AO14656 332 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 HTR3BO95264 441 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 TSPAN15O95858 294 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 LALBAP00709 142 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 CSF1P09603 554 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 VSIG10L2P0DP72 767 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 CD34P28906 385 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 BDKRB2P30411 391 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 ZNF93P35789 620 aaPredicted RBP20.29■□□□□ 0.84
VEGFA-229ENST00000621747 CAPGP40121 348 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 OR3A4PP47883 348 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 ST3GAL4Q11206 333 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 BAIAP2L2Q6UXY1 529 aa20.29■□□□□ 0.84
VEGFA-229ENST00000621747 ASCL4Q6XD76 172 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms