RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 LMO1P25800 156 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 ATAD3CQ5T2N8 411 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 FIP1L1Q6UN15 594 aaKnown RBP11.28□□□□□ -0.6
NEK3-210ENST00000620675 Q71RC1 249 aaPredicted RBP11.28□□□□□ -0.6
NEK3-210ENST00000620675 NAV3Q8IVL0 2385 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 SUMF2Q8NBJ7 301 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 PLPPR1Q8TBJ4 325 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 DYNC2LI1Q8TCX1 351 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 DACT3Q96B18 629 aaPredicted RBP11.28□□□□□ -0.6
NEK3-210ENST00000620675 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 MED30Q96HR3 178 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 DCTN5Q9BTE1 182 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 C19orf12Q9NSK7 152 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 TGFAP01135 160 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 EDDM3AQ14507 147 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 GRK1Q15835 563 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 OR2W3Q7Z3T1 314 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 DTX3Q8N9I9 347 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 H1FXQ92522 213 aaKnown RBP11.28□□□□□ -0.6
NEK3-210ENST00000620675 COQ2Q96H96 371 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
NEK3-210ENST00000620675 FOXI3A8MTJ6 420 aaPredicted RBP11.27□□□□□ -0.61
NEK3-210ENST00000620675 A8MXK9 166 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 MSMBP08118 114 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 VEGFCP49767 419 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 BMXP51813 675 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 DLX1P56177 255 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 TMEM50BP56557 158 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 ERVFRD-1P60508 538 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 PRB3Q04118 309 aaPredicted RBP11.27□□□□□ -0.61
NEK3-210ENST00000620675 AESQ08117 197 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 PAN3Q58A45 887 aaKnown RBP11.27□□□□□ -0.61
NEK3-210ENST00000620675 LRRC10Q5BKY1 277 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 NKAPLQ5M9Q1 402 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 OLFML2AQ68BL7 652 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 C6orf201Q7Z4U5 140 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 OR8H2Q8N162 312 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 LINC01356Q8N9X3 169 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 MRPS24Q96EL2 167 aaKnown RBP11.27□□□□□ -0.61
NEK3-210ENST00000620675 SNX22Q96L94 193 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 DPCDQ9BVM2 203 aaPredicted RBP11.27□□□□□ -0.61
NEK3-210ENST00000620675 RCC2Q9P258 522 aaKnown RBP11.27□□□□□ -0.61
NEK3-210ENST00000620675 FBLN5Q9UBX5 448 aa11.27□□□□□ -0.61
NEK3-210ENST00000620675 TRAV39A0A0B4J263 110 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 B4DSR2 109 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 LY6G6DO95868 133 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 ZNF182P17025 639 aaPredicted RBP11.26□□□□□ -0.61
NEK3-210ENST00000620675 GLIPR1P48060 266 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 PLAC9Q5JTB6 97 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 RAB12Q6IQ22 244 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 TCF23Q7RTU1 214 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 FAM89BQ8N5H3 189 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 SULT4A1Q9BR01 284 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 DCUN1D5Q9BTE7 237 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 SEBOXQ9HB31 216 aaPredicted RBP11.26□□□□□ -0.61
NEK3-210ENST00000620675 HIF1ANQ9NWT6 349 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 RSL24D1Q9UHA3 163 aaKnown RBP11.26□□□□□ -0.61
NEK3-210ENST00000620675 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
NEK3-210ENST00000620675 ELF5Q9UKW6 265 aaPredicted RBP11.26□□□□□ -0.61
NEK3-210ENST00000620675 RAB22AQ9UL26 194 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 PEX16Q9Y5Y5 336 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 LOC105371242A0A075B767 164 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 UBE2QL1A1L167 161 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 HEXAP06865 529 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 CHATP28329 748 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 BLVRBP30043 206 aaPredicted RBP11.26□□□□□ -0.61
NEK3-210ENST00000620675 EDDM3BP56851 147 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 MPV17LQ2QL34 196 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 C5orf24Q7Z6I8 188 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 BCL7BQ9BQE9 202 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 IFT22Q9H7X7 185 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 ZMAT3Q9HA38 289 aaKnown RBP11.26□□□□□ -0.61
NEK3-210ENST00000620675 PCDHB16Q9NRJ7 776 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 COMMD3Q9UBI1 195 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 GLS2Q9UI32 602 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 NF1P21359 2839 aa11.26□□□□□ -0.61
NEK3-210ENST00000620675 RAB27BO00194 218 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 NOL3O60936 208 aaKnown RBP11.25□□□□□ -0.61
NEK3-210ENST00000620675 AVPP01185 164 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 CPT2P23786 658 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 RORCP51449 518 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 MADCAM1Q13477 382 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 ZNF273Q14593 569 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 CYB5R2Q6BCY4 276 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 Q6ZPA2 131 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 ARHGAP5-AS1Q96IT6 56 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 FAAP24Q9BTP7 215 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 RHBDL2Q9NX52 303 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 KCNK7Q9Y2U2 307 aa11.25□□□□□ -0.61
NEK3-210ENST00000620675 PDCD6O75340 191 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 FOXH1O75593 365 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 FUT3P21217 361 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 GZMKP49863 264 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 NPY4RP50391 375 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 GDPD3Q7L5L3 318 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 LINC00596Q86U02 117 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 SAMD12Q8N8I0 201 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 CHST4Q8NCG5 386 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 TMEM186Q96B77 213 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 HDHD3Q9BSH5 251 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms