RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PLCXD3Q63HM9 321 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 OR4D6Q8NGJ1 314 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 ASB17Q8WXJ9 295 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 S1PR3Q99500 378 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 DGCR6LQ9BY27 220 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 YIPF3Q9GZM5 350 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 FN3KQ9H479 309 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 IFT22Q9H7X7 185 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 GNB4Q9HAV0 340 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 CMC2Q9NRP2 79 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 NKIRAS1Q9NYS0 192 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 SAMD4AQ9UPU9 718 aaKnown RBP3.51□□□□□ -1.85
SNCA-213ENST00000618500 PKD1P98161 4303 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 TRBV4-1A0A0J9YWV2 114 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 KBTBD11-OT1A0A1B0GTJ5 212 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 LOC110117498-PIK3R3F6TDL0 507 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 AIREO43918 545 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 EIF4EBP3O60516 100 aaPredicted RBP3.51□□□□□ -1.85
SNCA-213ENST00000618500 ENTPD6O75354 484 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 JUNBP17275 347 aaPredicted RBP3.51□□□□□ -1.85
SNCA-213ENST00000618500 FASP25445 335 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 GDNFP39905 211 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 FUT6P51993 359 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 MADCAM1Q13477 382 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 APOFQ13790 326 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 SPATS1Q496A3 300 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 LRRC23Q53EV4 343 aaPredicted RBP3.51□□□□□ -1.85
SNCA-213ENST00000618500 LCN12Q6JVE5 192 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 CD200R1LQ6Q8B3 271 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 MOB3CQ70IA8 216 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 ZNF329Q86UD4 541 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 YIPF7Q8N8F6 280 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 HAVCR2Q8TDQ0 301 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 ZNRF4Q8WWF5 429 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 EDARADDQ8WWZ3 215 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 RPEQ96AT9 228 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 TPD52L3Q96J77 140 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 C16orf45Q96MC5 204 aaPredicted RBP3.51□□□□□ -1.85
SNCA-213ENST00000618500 MBOAT4Q96T53 435 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 EBF4Q9BQW3 602 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 RERGLQ9H628 205 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 FAM53CQ9NYF3 392 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 ABCD2Q9UBJ2 740 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 SLC7A11Q9UPY5 501 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 RYR1P21817 5038 aa3.51□□□□□ -1.85
SNCA-213ENST00000618500 PSPNO60542 156 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 SAP30O75446 220 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 KDM4BO94953 1096 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 MOSP00540 346 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 GAPDHP04406 335 aaKnown RBP3.5□□□□□ -1.85
SNCA-213ENST00000618500 LYNP07948 512 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 SLC2A1P11166 492 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 GRK1Q15835 563 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 C21orf62-AS1Q17RA5 79 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 PRAMEF5Q5TYX0 476 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 OTPQ5XKR4 325 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 FAM71F2Q6NXP2 309 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 TMEM104Q8NE00 496 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 OR14K1Q8NGZ2 314 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 HOPXQ9BPY8 73 aaPredicted RBP3.5□□□□□ -1.85
SNCA-213ENST00000618500 TOLLIPQ9H0E2 274 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 GORASP2Q9H8Y8 452 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 IDI2-AS1Q9NZ38 188 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 C12orf77C9JDV5 145 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 GSC2O15499 205 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 MMP23AO75900 390 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 KRT36O76013 467 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 RGS11O94810 467 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 MT-ND2P03891 347 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 ZNF3P17036 446 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 IL3RAP26951 378 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 HAAOP46952 286 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 GYS2P54840 703 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 RAB25P57735 213 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 FAM209BQ5JX69 171 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 LYPD4Q6UWN0 246 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 UTS2BQ765I0 119 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 VTCN1Q7Z7D3 282 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 NPBQ8NG41 125 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 FAM81AQ8TBF8 368 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 DLX4Q92988 240 aaPredicted RBP3.5□□□□□ -1.85
SNCA-213ENST00000618500 KIRREL1Q96J84 757 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 HRASLS5Q96KN8 279 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 NABP2Q9BQ15 211 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 ZC4H2Q9NQZ6 224 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 CENPMQ9NSP4 180 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 ACTR3BQ9P1U1 418 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 FAM32AQ9Y421 112 aaKnown RBP3.5□□□□□ -1.85
SNCA-213ENST00000618500 ABCA13Q86UQ4 5058 aa3.5□□□□□ -1.85
SNCA-213ENST00000618500 IGHV1-3A0A0C4DH29 117 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 ODAMA1E959 279 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 TVP23AA6NH52 213 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 MRASO14807 208 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 LANCL1O43813 399 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 GATBO75879 557 aaKnown RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 NDUFA3O95167 84 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 APOL3O95236 402 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 IL1AP01583 271 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 SLC2A5P22732 501 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 EDDM3BP56851 147 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms