RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 DSCAML1Q8TD84 2053 aa15.37■□□□□ 0.05
CDX1-202ENST00000616154 F8VVB4 439 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 F8VWA3 439 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 K7N7A8 449 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 CCRL2O00421 344 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 OPN1MWP04001 364 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 TK1P04183 234 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 HSMCR30P0CW71 290 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 OPN1MW2P0DN77 364 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 OPN1MW3P0DN78 364 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 AZGP1P25311 298 aaKnown RBP15.36■□□□□ 0.05
CDX1-202ENST00000616154 BEAN1Q3B7T3 259 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 LIPKQ5VXJ0 399 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 TMEM200BQ69YZ2 307 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 CD200R1LQ6Q8B3 271 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 LHFPL2Q6ZUX7 228 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 SLC25A26Q70HW3 274 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 KLHDC1Q8N7A1 406 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 OR5AK2Q8NH90 309 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 FGGYQ96C11 551 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 FOXJ3Q9UPW0 622 aa15.36■□□□□ 0.05
CDX1-202ENST00000616154 hCG_1809904A0A1W2PP81 198 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 A0A1W2PPE2 198 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 A0A1W2PR64 198 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 A0A1W2PRV1 198 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 MEGF11A6BM72 1044 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 CHST1O43916 411 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 SC5DO75845 299 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 PAX6P26367 422 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 CEBPDP49716 269 aaPredicted RBP15.35■□□□□ 0.05
CDX1-202ENST00000616154 ATP1B3P54709 279 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 KPRPQ5T749 579 aaPredicted RBP15.35■□□□□ 0.05
CDX1-202ENST00000616154 MS4A15Q8N5U1 240 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 DTX3Q8N9I9 347 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 PIFOQ8TCI5 191 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 YIPF6Q96EC8 236 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 NPFFR1Q9GZQ6 430 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 ZNF281Q9Y2X9 895 aa15.35■□□□□ 0.05
CDX1-202ENST00000616154 NOTCH3Q9UM47 2321 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 TRBV5-5A0A0J9YX44 114 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 G3V4G9 280 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 CHRM2P08172 466 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 ZNF20P17024 532 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 GALP22466 123 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 COX7A1P24310 79 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 PSMA1P25786 263 aaKnown RBP15.34■□□□□ 0.05
CDX1-202ENST00000616154 BMXP51813 675 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 ZNF146Q15072 292 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 TRAM1Q15629 374 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 YIF1BQ5BJH7 314 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 PARP16Q8N5Y8 322 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 ZNF676Q8N7Q3 588 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 C11orf44Q8N8P7 122 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 SLAMF9Q96A28 289 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 COMMD4Q9H0A8 199 aa15.34■□□□□ 0.05
CDX1-202ENST00000616154 PNMA8CA0A1B0GUJ8 204 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 VGLL3A8MV65 326 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 CCL3L1P16619 93 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 MTCP1P56278 107 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 LGALS4P56470 323 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 ERVFRD-1P60508 538 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 COL10A1Q03692 680 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 PDZK1IP1Q13113 114 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 ZNF273Q14593 569 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 SAMD5Q5TGI4 173 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 HIST2H2BDQ6DRA6 164 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 ZNF529Q6P280 563 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 UNQ9370/PRO34162Q6UXP9 181 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 OR4M1Q8NGD0 313 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 OR13C3Q8NGS6 347 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 RHOFQ9HBH0 211 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 OR14J1Q9UGF5 321 aa15.33■□□□□ 0.04
CDX1-202ENST00000616154 FAM90A8PA6NJQ4 464 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 RBP4P02753 201 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 CD36P16671 472 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 DLX6P56179 175 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 RPS25P62851 125 aaKnown RBP15.32■□□□□ 0.04
CDX1-202ENST00000616154 SPIN3Q5JUX0 258 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 SAXO1Q8IYX7 474 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 OR8H2Q8N162 312 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 BATF2Q8N1L9 274 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 GPR148Q8TDV2 347 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 ZCCHC4Q9H5U6 513 aa15.32■□□□□ 0.04
CDX1-202ENST00000616154 IGKV1-12A0A0C4DH73 117 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 TMEM82A0PJX8 343 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 C17orf98A8MV24 154 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 KDM4BO94953 1096 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 IGKV1D-12P01611 117 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 VSIG10L2P0DP72 767 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 NPBWR2P48146 333 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 FBLN7Q53RD9 439 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 ZNF782Q6ZMW2 699 aaPredicted RBP15.31■□□□□ 0.04
CDX1-202ENST00000616154 TMEM91Q6ZNR0 172 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 LHFPL4Q7Z7J7 247 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 FAM58AQ8N1B3 248 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 OR13C9Q8NGT0 318 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 EMG1Q92979 244 aaKnown RBP15.31■□□□□ 0.04
CDX1-202ENST00000616154 SNX22Q96L94 193 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 ZNF702PQ9H963 129 aa15.31■□□□□ 0.04
CDX1-202ENST00000616154 HMG20AQ9NP66 347 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms