RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 RNF181Q9P0P0 153 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 SEMA5BQ9P283 1151 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 NUP205Q92621 2012 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 LCTP09848 1927 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 TRBV24-1A0A075B6N3 115 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 NEURL1O76050 574 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 GYPAP02724 150 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ZP1P60852 638 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CRMP1Q14194 572 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 GFI1BQ5VTD9 330 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CPEB2Q7Z5Q1 589 aaKnown RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 HMGN2P46Q86SG4 172 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 METTL27Q8N6F8 245 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 NAA60Q9H7X0 242 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CTSDP07339 412 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 GPR183P32249 361 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 DEFB132Q7Z7B7 95 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 C5orf30Q96GV9 206 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 HARBI1Q96MB7 349 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 NMNAT3Q96T66 252 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 PSENENQ9NZ42 101 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CLEC3AO75596 197 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CLDN7O95471 211 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CORO1AP31146 461 aaKnown RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 IER3P46695 156 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF117Q03924 483 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 GGTLC2Q14390 218 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 OR2K2Q8NGT1 345 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 MMP25Q9NPA2 562 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 TAC3Q9UHF0 121 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 HDGFL3Q9Y3E1 203 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 TMEM250H0YL14 139 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 RND3P61587 244 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 SYT9Q86SS6 491 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 LSRQ86X29 649 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 D2HGDHQ8N465 521 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 MRPL30Q8TCC3 161 aaKnown RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CDX2Q99626 313 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ARG2P78540 354 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CCSMST1Q4G0I0 132 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 DMKNQ6E0U4 476 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 OR4X2Q8NGF9 303 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 TAS2R4Q9NYW5 299 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 H3BNC9 293 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 RAMP3O60896 148 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ACVRL1P37023 503 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 FLT3LGP49771 235 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 C10orf91Q5T1B1 145 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 OR4D9Q8NGE8 314 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 PTPN18Q99952 460 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 PARLQ9H300 379 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 C7orf71A4D174 169 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 H3BVH4 76 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 DDNO94850 711 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 Q1RN00 199 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 OR10V1Q8NGI7 309 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 OR4X1Q8NH49 305 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 EDARADDQ8WWZ3 215 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 MAP1LC3AQ9H492 121 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 IGHV2-5P01817 119 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ADH4P08319 380 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 LRP10Q7Z4F1 713 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 DOCK4Q8N1I0 1966 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 PPP1R35Q8TAP8 253 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF160Q9HCG1 818 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 NGBQ9NPG2 151 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 EMC9Q9Y3B6 208 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 A0A087WUU8 490 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 TMEM8BA6NDV4 472 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 HSD52Q0P140 79 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 RNFT1Q5M7Z0 435 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 TAS1R1Q7RTX1 841 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 SMG9Q9H0W8 520 aaKnown RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 B4GALT7Q9UBV7 327 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 EREGO14944 169 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF205O95201 554 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 HMGN2P05204 90 aaKnown RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 NOVP48745 357 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CTSL3PQ5NE16 218 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 MUCL1Q96DR8 90 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 SDK1Q7Z5N4 2213 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 SRSF10O75494 262 aaKnown RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 GJB5O95377 273 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 THY1P04216 161 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 SPINK8P0C7L1 97 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 DCDP81605 110 aaKnown RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF562Q6V9R5 426 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 SLC36A1Q7Z2H8 476 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 RABAC1Q9UI14 185 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 FAM221AA4D161 298 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ZNF860A6NHJ4 632 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 IQCF3P0C7M6 154 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 ACSF3Q4G176 576 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-213ENST00000613099 CD207Q9UJ71 328 aa4.41□□□□□ -1.7
VPS13D-213ENST00000613099 GAB4Q2WGN9 574 aa4.4□□□□□ -1.7
VPS13D-213ENST00000613099 TMEM91Q6ZNR0 172 aa4.4□□□□□ -1.7
VPS13D-213ENST00000613099 TMEM70Q9BUB7 260 aa4.4□□□□□ -1.7
VPS13D-213ENST00000613099 ULBP2Q9BZM5 246 aa4.4□□□□□ -1.7
VPS13D-213ENST00000613099 TMEM272A0A1B0GTI8 110 aa4.4□□□□□ -1.7
VPS13D-213ENST00000613099 C11orf98E9PRG8 122 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms