RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CHATP28329 748 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 HOXA6P31267 233 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 CNN3Q15417 329 aaKnown RBP9.5□□□□□ -0.89
FAM3A-221ENST00000612856 MICBQ29980 383 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 PYY3Q5JQD4 70 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 IL34Q6ZMJ4 242 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 TMPRSS11FQ6ZWK6 438 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 OR56B1Q8NGI3 324 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 UBTD1Q9HAC8 227 aa9.5□□□□□ -0.89
FAM3A-221ENST00000612856 TRAV39A0A0B4J263 110 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 TMEM212A6NML5 194 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 ADAM10O14672 748 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 C1QL1O75973 258 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 PET100P0DJ07 73 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 CALCRP30988 508 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 CAV2P51636 162 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 NANOS3P60323 173 aaKnown RBP9.49□□□□□ -0.89
FAM3A-221ENST00000612856 PLPPR5Q32ZL2 321 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 LYG2Q86SG7 212 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 MISP3Q96FF7 219 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 OCSTAMPQ9BR26 566 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 PBOV1Q9GZY1 135 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 METTL1Q9UBP6 276 aaKnown RBP9.49□□□□□ -0.89
FAM3A-221ENST00000612856 BORCS7-ASMTA0A0B4J1R7 106 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 E9PQ18 207 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 NGFRP08138 427 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 OR8U8P0C7N1 319 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 LPAR6P43657 344 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 RPL29P47914 159 aaKnown RBP9.49□□□□□ -0.89
FAM3A-221ENST00000612856 VAMP2P63027 116 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 CCL8P80075 99 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 ZFP36L1Q07352 338 aaKnown RBP9.49□□□□□ -0.89
FAM3A-221ENST00000612856 MPPED2Q15777 294 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF718Q3SXZ3 478 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 MESTQ5EB52 335 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 SLC36A1Q7Z2H8 476 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF610Q8N9Z0 462 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 DTD1Q8TEA8 209 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 PRSS27Q9BQR3 290 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 RNF222A6NCQ9 220 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 MPPED1O15442 326 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 TSPAN2O60636 221 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 DIRAS3O95661 229 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 NRASP01111 189 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 SNRPCP09234 159 aaKnown RBP9.49□□□□□ -0.89
FAM3A-221ENST00000612856 CD37P11049 281 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 IAH1Q2TAA2 248 aaPredicted RBP9.49□□□□□ -0.89
FAM3A-221ENST00000612856 NSUN5P2Q63ZY6 315 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 LINC01560Q8TB33 94 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 C14orf144Q96I85 54 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 EHFQ9NZC4 300 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 ST6GALNAC2Q9UJ37 374 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 ETV7Q9Y603 341 aa9.49□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF732B4DXR9 585 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 UBE2CO00762 179 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 ACKR3P25106 362 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 DVL1P1P54792 670 aaPredicted RBP9.48□□□□□ -0.89
FAM3A-221ENST00000612856 SUMO3P55854 103 aaPredicted RBP9.48□□□□□ -0.89
FAM3A-221ENST00000612856 RPP30P78346 268 aaKnown RBP9.48□□□□□ -0.89
FAM3A-221ENST00000612856 TLE1Q04724 770 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 MGAT2Q10469 447 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 RAB32Q13637 225 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 SLC17A1Q14916 467 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF239Q16600 458 aaKnown RBP9.48□□□□□ -0.89
FAM3A-221ENST00000612856 GGNBP1Q5YKI7 109 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 SNX22Q96L94 193 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 TECTBQ96PL2 329 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 FAM212BQ9NTI7 297 aaPredicted RBP9.48□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF391Q9UJN7 358 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 ZDHHC8Q9ULC8 765 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 RNF150Q9ULK6 438 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 KIAA1549LQ6ZVL6 1849 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 MUC3AQ02505 3323 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF883P0CG24 379 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 GLRA1P23415 457 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 GNB2P62879 340 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 DHODHQ02127 395 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 TCF15Q12870 199 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 LPCAT3Q6P1A2 487 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 MRGPRGQ86SM5 289 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 METTL9Q9H1A3 318 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 BCO1Q9HAY6 547 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 LOC100289279A0A1B0GTE1 492 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 IGKV3-11P04433 115 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 FCGR2CP31995 323 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 ZNF343Q6P1L6 599 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 NECAP1Q8NC96 275 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 ADAD2Q8NCV1 583 aaKnown RBP9.48□□□□□ -0.89
FAM3A-221ENST00000612856 OR4K15Q8NH41 348 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 MRI1Q9BV20 369 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 C9orf170A2RU37 121 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 MSGN1A6NI15 193 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 C1QTNF9BB2RNN3 333 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 C1QTNF9P0C862 333 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 TAS2R60P59551 318 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 PCK2Q16822 640 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 GFI1BQ5VTD9 330 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 FBXW12Q6X9E4 464 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 OR11L1Q8NGX0 322 aa9.48□□□□□ -0.89
FAM3A-221ENST00000612856 OR1F12Q8NHA8 337 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms