RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ARL6IP1Q15041 203 aa13.58□□□□□ -0.24
CTSA-214ENST00000606788 FAM53AQ6NSI3 398 aaPredicted RBP13.58□□□□□ -0.24
CTSA-214ENST00000606788 ASCL4Q6XD76 172 aa13.58□□□□□ -0.24
CTSA-214ENST00000606788 WDR86Q86TI4 376 aa13.58□□□□□ -0.24
CTSA-214ENST00000606788 PDZD9Q8IXQ8 264 aa13.58□□□□□ -0.24
CTSA-214ENST00000606788 ZNF610Q8N9Z0 462 aa13.58□□□□□ -0.24
CTSA-214ENST00000606788 OR5P3Q8WZ94 311 aa13.58□□□□□ -0.24
CTSA-214ENST00000606788 GMPPAQ96IJ6 420 aaPredicted RBP13.58□□□□□ -0.24
CTSA-214ENST00000606788 OBP2BQ9NPH6 170 aa13.58□□□□□ -0.24
CTSA-214ENST00000606788 HSF4Q9ULV5 492 aa13.58□□□□□ -0.24
CTSA-214ENST00000606788 KIR2DL2P43627 348 aaPredicted RBP13.57□□□□□ -0.24
CTSA-214ENST00000606788 SUMF2Q8NBJ7 301 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 IGKV1D-13A0A0B4J2D9 117 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 A0A0D9SG52 128 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 MED19A0JLT2 244 aaPredicted RBP13.57□□□□□ -0.24
CTSA-214ENST00000606788 A6NLC8 198 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 WNT9BO14905 357 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 FBXO24O75426 580 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 IGKV1-13P0DP09 117 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 RGS7BPQ6MZT1 257 aaPredicted RBP13.57□□□□□ -0.24
CTSA-214ENST00000606788 VHLLQ6RSH7 139 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 STPG2Q8N412 459 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 NANOS1Q8WY41 292 aaKnown RBP13.57□□□□□ -0.24
CTSA-214ENST00000606788 DLL3Q9NYJ7 618 aa13.57□□□□□ -0.24
CTSA-214ENST00000606788 PTPRQQ9UMZ3 2332 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 LRP3O75074 770 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 B3GALNT1O75752 331 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 NRN1LQ496H8 165 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 LHFPL5Q8TAF8 219 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 TP53RKQ96S44 253 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 ASF1BQ9NVP2 202 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 PFDN2Q9UHV9 154 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 SMPD2O60906 423 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 PPYP01298 95 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 FGF12P61328 243 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 TGFBR3Q03167 851 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 HERPUD1Q15011 391 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 WNT2BQ93097 391 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 C2orf50Q96LR7 162 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 RAB18Q9NP72 206 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 CLCF1Q9UBD9 225 aa13.56□□□□□ -0.24
CTSA-214ENST00000606788 OR2F2O95006 317 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 HOXC12P31275 282 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 PSG7Q13046 419 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 OR2F1Q13607 317 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 IZUMO4Q1ZYL8 232 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 OR52M1Q8NGK5 317 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 BSCL2Q96G97 398 aaPredicted RBP13.55□□□□□ -0.24
CTSA-214ENST00000606788 C1orf123Q9NWV4 160 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 CRYM-AS1A6NIL9 109 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 CTSDP07339 412 aaPredicted RBP13.55□□□□□ -0.24
CTSA-214ENST00000606788 SLC25A4P12235 298 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 ZNF14P17017 642 aaPredicted RBP13.55□□□□□ -0.24
CTSA-214ENST00000606788 GNG3P63215 75 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 FAM58AQ8N1B3 248 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 TPRX1Q8N7U7 411 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 ARPC5LQ9BPX5 153 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 ADAT1Q9BUB4 502 aaKnown RBP13.55□□□□□ -0.24
CTSA-214ENST00000606788 WDR1O75083 606 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 HLA-GP17693 338 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 DTYMKP23919 212 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 PRAMEF6Q5VXH4 476 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 TMEM65Q6PI78 240 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 POC1AQ8NBT0 407 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 OR5A2Q8NGI9 324 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 PLPPR2Q96GM1 343 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 KIRREL1Q96J84 757 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 MAGT1Q9H0U3 335 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 CCL28Q9NRJ3 127 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 EDARQ9UNE0 448 aa13.55□□□□□ -0.24
CTSA-214ENST00000606788 USF3Q68DE3 2245 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 TRAV24A0A0B4J272 114 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 CEACAM18A8MTB9 384 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 GABRA6Q16445 453 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 TUSC1Q2TAM9 212 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 GAPTQ8N292 157 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 SCCPDHQ8NBX0 429 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 OR51H1Q8NH63 302 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 REG4Q9BYZ8 158 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 NMES1Q9C002 83 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 TMEM231Q9H6L2 316 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 NAA60Q9H7X0 242 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 TAS2R3Q9NYW6 316 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 DUSP13Q9UII6 198 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 FBXO9Q9UK97 447 aaPredicted RBP13.54□□□□□ -0.24
CTSA-214ENST00000606788 KCNIP3Q9Y2W7 256 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 PTPRBP23467 1997 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 IGKV1-6A0A0C4DH72 117 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 AGPAT2O15120 278 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 CST4P01036 141 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 TMEM268Q5VZI3 342 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 RPL7L1Q6DKI1 246 aaKnown RBP13.54□□□□□ -0.24
CTSA-214ENST00000606788 RTL6Q6ICC9 239 aa13.54□□□□□ -0.24
CTSA-214ENST00000606788 MRPS24Q96EL2 167 aaKnown RBP13.54□□□□□ -0.24
CTSA-214ENST00000606788 DEGS1O15121 323 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 NXPH2O95156 264 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 CRYZL1O95825 349 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 IFNA21P01568 189 aa13.53□□□□□ -0.24
CTSA-214ENST00000606788 ZNF16P17020 682 aaPredicted RBP13.53□□□□□ -0.24
CTSA-214ENST00000606788 NUP62P37198 522 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms