RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	SNAI3	Q3KNW1	292 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	FAM219A	Q8IW50	185 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	LRRC18	Q8N456	261 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	TMEM156	Q8N614	296 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	C14orf79	Q96F83	325 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	ABHD17A	Q96GS6	310 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	C18orf12	Q96KH6	178 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	SIGLEC12	Q96PQ1	595 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	HES7	Q9BYE0	225 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	LIME1	Q9H400	295 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	RGCC	Q9H4X1	137 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	AK3	Q9UIJ7	227 aa		13.31	□□□□□ -0.28
CELF4-223	ENST00000603232	TLN1	Q9Y490	2541 aa	Known RBP	13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	C1orf196	B1AJZ1	125 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	GPR137B	O60478	399 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	OR8U9	P0C7N5	309 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	ACKR3	P25106	362 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	P2RY1	P47900	373 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	OR8B8	Q15620	311 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	TSC22D1	Q15714	1073 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	SPINK14	Q6IE38	97 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	LIAT1	Q6ZQX7	453 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	ZNF561	Q8N587	486 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	OR8U1	Q8NH10	309 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	SLC39A7	Q92504	469 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	ZNF251	Q9BRH9	671 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	FAAP24	Q9BTP7	215 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	GSN-AS1	Q9NRJ2	163 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	GPR173	Q9NS66	373 aa		13.3	□□□□□ -0.28
CELF4-223	ENST00000603232	PRRC2C	Q9Y520	2896 aa	Known RBP	13.29	□□□□□ -0.28
CELF4-223	ENST00000603232		A0A1W2PPE3	182 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232		G3V3Y1	287 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	SGCE	O43556	437 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	MBP	P02686	304 aa	Predicted RBP	13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	MT-ND4L	P03901	98 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	DBH	P09172	617 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	SNCA	P37840	140 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	RBP2	P50120	134 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	DMRTC1	Q5HYR2	192 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	SLC16A13	Q7RTY0	426 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	REEP6	Q96HR9	211 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	AKR1E2	Q96JD6	320 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	TECTB	Q96PL2	329 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	SYT3	Q9BQG1	590 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	BCO1	Q9HAY6	547 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	METTL1	Q9UBP6	276 aa	Known RBP	13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	TP53TG5	Q9Y2B4	290 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	STRAP	Q9Y3F4	350 aa	Known RBP	13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	IGKV1-27	A0A075B6S5	117 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232		A0A1B0GW64	132 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	OR6C6	A6NF89	314 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	MKRN2OS	H3BPM6	223 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	CBR3	O75828	277 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	IGHV2-5	P01817	119 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	FABP1	P07148	127 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	CCL3	P10147	92 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	RAC3	P60763	192 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	RAET1L	Q5VY80	246 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	FOXRED2	Q8IWF2	684 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	LGI3	Q8N145	548 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	OR1F12	Q8NHA8	337 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	CPT1C	Q8TCG5	803 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	SECTM1	Q8WVN6	248 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	MOB3A	Q96BX8	217 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	MSI2	Q96DH6	328 aa	Known RBP	13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	UCN2	Q96RP3	112 aa		13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	LSM5	Q9Y4Y9	91 aa	Known RBP	13.29	□□□□□ -0.28
CELF4-223	ENST00000603232	NCKAP5	O14513	1909 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232		A0A0G2JMM0	328 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232		A0A0J9YW62	118 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232		A0A1W2PPB8	328 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232		A0A1W2PRS3	328 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	ZNF850	A8MQ14	1090 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	KIR3DP1	A8MWS1	328 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	AGPAT2	O15120	278 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	NEURL1	O76050	574 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	OR5AC1	P0C628	307 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	DUSP1	P28562	367 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	POLR2G	P62487	172 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	ARG2	P78540	354 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	OR1C1	Q15619	314 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	TAF9	Q16594	264 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	ABCA11P	Q4W5N1	156 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	ERGIC1	Q969X5	290 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	BORCS8	Q96FH0	119 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	SMDT1	Q9H4I9	107 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	PLSCR2	Q9NRY7	297 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	TMEM38B	Q9NVV0	291 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	LUZP4	Q9P127	313 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	LRFN1	Q9P244	771 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	DKKL1	Q9UK85	242 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	TMED3	Q9Y3Q3	217 aa		13.28	□□□□□ -0.28
CELF4-223	ENST00000603232	TSPAN15	O95858	294 aa		13.27	□□□□□ -0.28
CELF4-223	ENST00000603232	MAS1L	P35410	378 aa		13.27	□□□□□ -0.28
CELF4-223	ENST00000603232	CYB561	P49447	251 aa		13.27	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms