RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 FAM90A7PA6NKC0 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FOXI3A8MTJ6 420 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A22PA8MWA6 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A12PA8MX19 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A5PA8MXJ8 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A23PA8MXZ1 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 ZNF701M0R085 212 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 SOCS1O15524 211 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 TMEM127O75204 238 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A15PP0C7V4 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A13PP0C7W8 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A14PP0C7W9 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM90A24PP0C7X0 464 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 CD99P14209 185 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 GZMKP49863 264 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 GRK1Q15835 563 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 MOGAT2Q3SYC2 334 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 PAN3Q58A45 887 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 OR8H2Q8N162 312 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 BPIFB2Q8N4F0 458 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 FAM89BQ8N5H3 189 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 LINC01356Q8N9X3 169 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 PTX4Q96A99 478 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 SPATA2Q9UM82 520 aa16.57■□□□□ 0.24
SHKBP1-222ENST00000600320 A6NHS1 94 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 B4DSR2 109 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 MSMBP08118 114 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 INHBBP09529 407 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 ZNF16P17020 682 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 ZNF182P17025 639 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 CHATP28329 748 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 VEGFCP49767 419 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 SCAND1P57086 179 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 BTN2A1Q7KYR7 527 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 H1FXQ92522 213 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 KCTD12Q96CX2 325 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 POM121Q96HA1 1249 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 SMR3AQ99954 134 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 MRI1Q9BV20 369 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 DPCDQ9BVM2 203 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 MMP26Q9NRE1 261 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 NDUFA13Q9P0J0 144 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 ETV7Q9Y603 341 aa16.56■□□□□ 0.24
SHKBP1-222ENST00000600320 DOCK11Q5JSL3 2073 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 VPS13CQ709C8 3753 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 PDCD6O75340 191 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 BLVRBP30043 206 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 TMEM50BP56557 158 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 PAX2Q02962 417 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 EDDM3AQ14507 147 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 ATXN7L3Q14CW9 347 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 NKAPLQ5M9Q1 402 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 RAB12Q6IQ22 244 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 TPRX1Q8N7U7 411 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 OR4M1Q8NGD0 313 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 PPP1R35Q8TAP8 253 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 PLPPR1Q8TBJ4 325 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 DACT3Q96B18 629 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 DGCR14Q96DF8 476 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 COQ2Q96H96 371 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 DCTN5Q9BTE1 182 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 ATG5Q9H1Y0 275 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 C19orf12Q9NSK7 152 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 RHBDL2Q9NX52 303 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 ING3Q9NXR8 418 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 CCDC59Q9P031 241 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 POLR3KQ9Y2Y1 108 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 PEX16Q9Y5Y5 336 aa16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 TEP1Q99973 2627 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-222ENST00000600320 LOC105371242A0A075B767 164 aa16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 RAB27BO00194 218 aa16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 MGST3O14880 152 aa16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 FUT3P21217 361 aa16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 CYB5R2Q6BCY4 276 aa16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 OR5D13Q8NGL4 314 aa16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 DYRK2Q92630 601 aa16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 SULT4A1Q9BR01 284 aa16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 COMMD3Q9UBI1 195 aa16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 RPUSD1Q9UJJ7 312 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-222ENST00000600320 TGFAP01135 160 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 CSN2P05814 226 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 EDDM3BP56851 147 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 AESQ08117 197 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 DYNC1I2Q13409 638 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 PLAC9Q5JTB6 97 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 GDPD3Q7L5L3 318 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 C6orf201Q7Z4U5 140 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 NEDD4LQ96PU5 975 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 DCUN1D5Q9BTE7 237 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 SLIRPQ9GZT3 109 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 SPACA1Q9HBV2 294 aa16.53■□□□□ 0.24
SHKBP1-222ENST00000600320 ABCA1O95477 2261 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 IGHV2-70DA0A0C4DH43 119 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 MEX3AA1L020 520 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 UBE2QL1A1L167 161 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 MCRIP1C9JLW8 97 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 GPR37O15354 613 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 SOX6P35712 828 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 GLIPR1P48060 266 aa16.52■□□□□ 0.24
SHKBP1-222ENST00000600320 P2RX3P56373 397 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms