RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	KISS1	Q15726	138 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	ZNF610	Q8N9Z0	462 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	NPRL2	Q8WTW4	380 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	PHB2	Q99623	299 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	CHST6	Q9GZX3	395 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	FBLN5	Q9UBX5	448 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	TMEM14DP	A8MWL7	114 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	NGF	P01138	241 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	IL2RA	P01589	272 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	CD3D	P04234	171 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	CRH	P06850	196 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	MPZ	P25189	248 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	MAS1L	P35410	378 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	TIMP3	P35625	211 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	TAS2R60	P59551	318 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	PMPCA	Q10713	525 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	MEF2D	Q14814	521 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	LYG2	Q86SG7	212 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	ZNF101	Q8IZC7	436 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	REPIN1	Q9BWE0	567 aa	Known RBP	13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	ATG5	Q9H1Y0	275 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	GPR173	Q9NS66	373 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318	STARD10	Q9Y365	291 aa		13.25	□□□□□ -0.29
DDX39A-209	ENST00000589318		A0A1W2PR80	420 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	C1QTNF9B	B2RNN3	333 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	SLC31A2	O15432	143 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	PPIH	O43447	177 aa	Known RBP	13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	F12	P00748	615 aa	Predicted RBP	13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	C1QTNF9	P0C862	333 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	RAB5A	P20339	215 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	CPT2	P23786	658 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	ATP1B3	P54709	279 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	DVL1P1	P54792	670 aa	Predicted RBP	13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	SRSF3	P84103	164 aa	Known RBP	13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	MST1L	Q2TV78	715 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	MOGAT2	Q3SYC2	334 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	COMMD1	Q8N668	190 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	ZDHHC22	Q8N966	263 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	MITD1	Q8WV92	249 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	GFOD1	Q9NXC2	390 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	SLC2A8	Q9NY64	477 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	RAB22A	Q9UL26	194 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318	PRR14L	Q5THK1	2151 aa		13.24	□□□□□ -0.29
DDX39A-209	ENST00000589318		A0A0A6YYH2	397 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	WIPF3	A6NGB9	483 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318		A6NJ64	397 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	FBXO24	O75426	580 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	CELA3B	P08861	270 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	PSMB6	P28072	239 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	APLNR	P35414	380 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	ALDH3B1	P43353	468 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	ID4	P47928	161 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	RBP2	P50120	134 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	F2RL1	P55085	397 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	PRR30	Q53SZ7	412 aa	Predicted RBP	13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	GLIPR1L1	Q6UWM5	242 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	REC114	Q7Z4M0	266 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	C1QL2	Q7Z5L3	287 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	SLC25A42	Q86VD7	318 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	WDR31	Q8NA23	367 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	PIGT	Q969N2	578 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	SNRNP40	Q96DI7	357 aa	Known RBP	13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	CLCC1	Q96S66	551 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	PRRT1	Q99946	306 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	NMES1	Q9C002	83 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	CACFD1	Q9UGQ2	172 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	PROCR	Q9UNN8	238 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	CHD8	Q9HCK8	2581 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	CACNA1A	O00555	2505 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	TRAV18	A0A075B6X5	111 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	GPR37	O15354	613 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	HLA-A	P01891	365 aa	Known RBP	13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	S100A2	P29034	98 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	CEACAM8	P31997	349 aa	Predicted RBP	13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	SPCS3	P61009	180 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	BEX5	Q5H9J7	111 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	OR52W1	Q6IF63	320 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	UNQ6126/PRO20091	Q6UXV3	157 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	CXorf67	Q86X51	503 aa	Predicted RBP	13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	TMEM104	Q8NE00	496 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	FAM46B	Q96A09	425 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	SPSB1	Q96BD6	273 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	MICU1	Q9BPX6	476 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	TUBD1	Q9UJT1	453 aa		13.23	□□□□□ -0.29
DDX39A-209	ENST00000589318	IGKV1-27	A0A075B6S5	117 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	RAB27B	O00194	218 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	TAAR5	O14804	337 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	HOXB5	P09067	269 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	HKR1	P10072	659 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	HOXA5	P20719	270 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	ZBTB25	P24278	435 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	UBE2N	P61088	152 aa	Known RBP	13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	TMED4	Q7Z7H5	227 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	OR5D18	Q8NGL1	313 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	GPER1	Q99527	375 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms