RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 NR1H4Q96RI1 486 aaPredicted RBP12.87□□□□□ -0.35
NCLN-203ENST00000587740 NKX3-1Q99801 234 aaPredicted RBP12.87□□□□□ -0.35
NCLN-203ENST00000587740 METTL9Q9H1A3 318 aa12.87□□□□□ -0.35
NCLN-203ENST00000587740 PPIL3Q9H2H8 161 aaKnown RBP12.87□□□□□ -0.35
NCLN-203ENST00000587740 HMG20AQ9NP66 347 aa12.87□□□□□ -0.35
NCLN-203ENST00000587740 PCDHB16Q9NRJ7 776 aa12.87□□□□□ -0.35
NCLN-203ENST00000587740 SLC25A10Q9UBX3 287 aaPredicted RBP12.87□□□□□ -0.35
NCLN-203ENST00000587740 GSTK1Q9Y2Q3 226 aa12.87□□□□□ -0.35
NCLN-203ENST00000587740 MAB21L2Q9Y586 359 aa12.87□□□□□ -0.35
NCLN-203ENST00000587740 C22orf46C9J442 243 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 FCN3O75636 299 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 HTR3BO95264 441 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 SELLP14151 372 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 NDUFB7P17568 137 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 CALRP27797 417 aaKnown RBP12.86□□□□□ -0.35
NCLN-203ENST00000587740 SNU13P55769 128 aaKnown RBP12.86□□□□□ -0.35
NCLN-203ENST00000587740 CAV3P56539 151 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 COL10A1Q03692 680 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 ZNF146Q15072 292 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 SPIN3Q5JUX0 258 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 SYT6Q5T7P8 510 aaPredicted RBP12.86□□□□□ -0.35
NCLN-203ENST00000587740 ASCL4Q6XD76 172 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 LRRTM1Q86UE6 522 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 H1FXQ92522 213 aaKnown RBP12.86□□□□□ -0.35
NCLN-203ENST00000587740 MUL1Q969V5 352 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 FOXRED1Q96CU9 486 aaPredicted RBP12.86□□□□□ -0.35
NCLN-203ENST00000587740 CNTD2Q9H8S5 307 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 SEBOXQ9HB31 216 aaPredicted RBP12.86□□□□□ -0.35
NCLN-203ENST00000587740 IL36RNQ9UBH0 155 aa12.86□□□□□ -0.35
NCLN-203ENST00000587740 MRPS28Q9Y2Q9 187 aaKnown RBP12.86□□□□□ -0.35
NCLN-203ENST00000587740 NOTCH3Q9UM47 2321 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 KIAA2026Q5HYC2 2103 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 TRDV1A0A1B0GX56 115 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 SH2D1BO14796 132 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 ENSAO43768 121 aaKnown RBP12.85□□□□□ -0.35
NCLN-203ENST00000587740 CDRT1O95170 752 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 HAND1O96004 215 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 CSTBP04080 98 aaKnown RBP12.85□□□□□ -0.35
NCLN-203ENST00000587740 GALP22466 123 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 BPIFB3P59826 476 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 PDCD1Q15116 288 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 GPR157Q5UAW9 335 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 AWAT2Q6E213 333 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 ELP2Q6IA86 826 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 CD200R1LQ6Q8B3 271 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 FGFRL1Q8N441 504 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 ASCC1Q8N9N2 400 aaKnown RBP12.85□□□□□ -0.35
NCLN-203ENST00000587740 OR10K1Q8NGX5 313 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 UQCC2Q9BRT2 126 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 IL36GQ9NZH8 169 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 POMT1Q9Y6A1 747 aa12.85□□□□□ -0.35
NCLN-203ENST00000587740 GPR137BO60478 399 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 ZNF780AO75290 641 aaPredicted RBP12.84□□□□□ -0.35
NCLN-203ENST00000587740 TK1P04183 234 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 LIPFP07098 398 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 MMP9P14780 707 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 MYL9P24844 172 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 DUSP1P28562 367 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 GPR176Q14439 515 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 GLIPR1L1Q6UWM5 242 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 SSMEM1Q8WWF3 244 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 DYRK2Q92630 601 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 SNX22Q96L94 193 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 TBX15Q96SF7 602 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 PCGF1Q9BSM1 259 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 FAM234AQ9H0X4 552 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 EXOSC4Q9NPD3 245 aaKnown RBP12.84□□□□□ -0.35
NCLN-203ENST00000587740 RPUSD1Q9UJJ7 312 aaKnown RBP12.84□□□□□ -0.35
NCLN-203ENST00000587740 STUB1Q9UNE7 303 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 SSR3Q9UNL2 185 aa12.84□□□□□ -0.35
NCLN-203ENST00000587740 PLXNB1O43157 2135 aa12.83□□□□□ -0.35
NCLN-203ENST00000587740 CENPVL3A0A0U1RRI6 287 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 G3V4G9 280 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 K7N7A8 449 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 IGHV4-59P01825 116 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 ZNF44P15621 663 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 CD36P16671 472 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 SERPINA2P20848 420 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 GABRR1P24046 479 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 RPL15P61313 204 aaKnown RBP12.83□□□□□ -0.36
NCLN-203ENST00000587740 SCN1BQ07699 218 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 BEAN1Q3B7T3 259 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 SLC22A6Q4U2R8 563 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 Q6ZPA2 131 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 LYPD6Q86Y78 171 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 OSR2Q8N2R0 312 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 Q8NFD4 153 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 OR4D6Q8NGJ1 314 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 OR51T1Q8NGJ9 327 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 OR5D13Q8NGL4 314 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 PPP1R35Q8TAP8 253 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 DCTN5Q9BTE1 182 aa12.83□□□□□ -0.36
NCLN-203ENST00000587740 TRIM64CA6NLI5 447 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 SIRPB1O00241 398 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 PDCD5O14737 125 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 DEGS1O15121 323 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 OR2H2O95918 312 aa12.82□□□□□ -0.36
NCLN-203ENST00000587740 PRB2P02812 416 aaPredicted RBP12.82□□□□□ -0.36
NCLN-203ENST00000587740 FGF9P31371 208 aaPredicted RBP12.82□□□□□ -0.36
NCLN-203ENST00000587740 PSMD7P51665 324 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms