RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760		Q499Y3	187 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	DDI2	Q5TDH0	399 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	ZNF626	Q68DY1	528 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	GDPGP1	Q6ZNW5	385 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	STX19	Q8N4C7	294 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	CHST4	Q8NCG5	386 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR5R1	Q8NH85	324 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	WFDC12	Q8WWY7	111 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	ORAI1	Q96D31	301 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	GPER1	Q99527	375 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	FAM192A	Q9GZU8	254 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	MEGF9	Q9H1U4	602 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	TMEM138	Q9NPI0	162 aa		10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	UBE2J1	Q9Y385	318 aa	Predicted RBP	10.8	□□□□□ -0.68
SREBF1-223	ENST00000584760	TRAV8-7	A0A075B6U6	113 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	TRBV5-7	A0A0A0MS05	114 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	PNMA8C	A0A1B0GUJ8	204 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760		A0A1B0GUS0	222 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	MAGEA13P	A6NCF6	341 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	FAM90A8P	A6NJQ4	464 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760		H3BUX3	64 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	PAX6	P26367	422 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	BDKRB2	P30411	391 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	AANAT	Q16613	207 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	LRRC75B	Q2VPJ9	315 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	LDLRAD2	Q5SZI1	272 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	ASCL4	Q6XD76	172 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	SATL1	Q86VE3	508 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	NANOGP1	Q8N7R0	232 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR11H6	Q8NGC7	330 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR51T1	Q8NGJ9	327 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR13D1	Q8NGV5	346 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	COQ2	Q96H96	371 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR14A2	Q96R54	314 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	SSX3	Q99909	188 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	IL36G	Q9NZH8	169 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	SESN1	Q9Y6P5	492 aa		10.79	□□□□□ -0.68
SREBF1-223	ENST00000584760	ODAM	A1E959	279 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	GPX5	O75715	221 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	MMP23A	O75900	390 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	ARG1	P05089	322 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	CDK1	P06493	297 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	ZNF93	P35789	620 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	PTGFR	P43088	359 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	GLIPR1	P48060	266 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	SCN1B	Q07699	218 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	AES	Q08117	197 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	RIPK1	Q13546	671 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	IL13RA2	Q14627	380 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	PIGY	Q3MUY2	71 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	C6orf141	Q5SZD1	244 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	RNLS	Q5VYX0	342 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	HIST2H2BD	Q6DRA6	164 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	LHFPL4	Q7Z7J7	247 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	TRAPPC6B	Q86SZ2	158 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	OR10K1	Q8NGX5	313 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	SGCD	Q92629	289 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	BEX1	Q9HBH7	125 aa		10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	TBL2	Q9Y4P3	447 aa	Known RBP	10.78	□□□□□ -0.68
SREBF1-223	ENST00000584760	TRGV10	A0A0A0MS01	117 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	IGHV2-26	A0A0B4J1V2	119 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	TRAV24	A0A0B4J272	114 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	CLPSL1	A2RUU4	121 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	FUOM	A2VDF0	154 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	VGLL3	A8MV65	326 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	DEGS1	O15121	323 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	CDRT1	O95170	752 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	CD1A	P06126	327 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	CEL	P19835	753 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	MYF6	P23409	242 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	LGALS4	P56470	323 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	SLC35A2	P78381	396 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	BDH1	Q02338	343 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	RSU1	Q15404	277 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	NHLRC3	Q5JS37	347 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	KRBOX4	Q5JUW0	171 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	OLFML2A	Q68BL7	652 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	BRICD5	Q6PL45	260 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760		Q6ZSV7	163 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	DYNAP	Q8N1N2	210 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	LINC01006	Q8NI28	216 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	CORO2A	Q92828	525 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	DERL3	Q96Q80	235 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	ZNF184	Q99676	751 aa	Predicted RBP	10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	CDCA4	Q9BXL8	241 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	ANKRD60	Q9BZ19	345 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	PPIL3	Q9H2H8	161 aa	Known RBP	10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	TMEM133	Q9H2Q1	129 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	CKLF	Q9UBR5	152 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	ERGIC3	Q9Y282	383 aa		10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	LSM2	Q9Y333	95 aa	Known RBP	10.77	□□□□□ -0.69
SREBF1-223	ENST00000584760	MEGF11	A6BM72	1044 aa		10.76	□□□□□ -0.69
SREBF1-223	ENST00000584760		M0QZ24	198 aa		10.76	□□□□□ -0.69
SREBF1-223	ENST00000584760	HSPB6	O14558	160 aa		10.76	□□□□□ -0.69
SREBF1-223	ENST00000584760	PIN1P1	O15428	100 aa		10.76	□□□□□ -0.69
SREBF1-223	ENST00000584760	HTR3B	O95264	441 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms