RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 MMP26Q9NRE1 261 aa6.94□□□□□ -1.3
ERBB2-216ENST00000584014 ONECUT1Q9UBC0 465 aa6.94□□□□□ -1.3
ERBB2-216ENST00000584014 DAPK2Q9UIK4 370 aa6.94□□□□□ -1.3
ERBB2-216ENST00000584014 CHTOPQ9Y3Y2 248 aaKnown RBP6.94□□□□□ -1.3
ERBB2-216ENST00000584014 MAB21L2Q9Y586 359 aa6.94□□□□□ -1.3
ERBB2-216ENST00000584014 HIVEP1P15822 2718 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 TRAV1-2A0A0B4J238 106 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 TRAV20A0A0B4J274 112 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 A8MV72 311 aaPredicted RBP6.93□□□□□ -1.3
ERBB2-216ENST00000584014 GEMIN2O14893 280 aaKnown RBP6.93□□□□□ -1.3
ERBB2-216ENST00000584014 SIGLEC5O15389 551 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 CD5LO43866 347 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 ZNF780AO75290 641 aaPredicted RBP6.93□□□□□ -1.3
ERBB2-216ENST00000584014 TFAP2AP05549 437 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 MGMTP16455 207 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 GALP22466 123 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 FGF9P31371 208 aaPredicted RBP6.93□□□□□ -1.3
ERBB2-216ENST00000584014 SRP14P37108 136 aaKnown RBP6.93□□□□□ -1.3
ERBB2-216ENST00000584014 NPY4RP50391 375 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 BMXP51813 675 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 NCS1P62166 190 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 ATXN7L3Q14CW9 347 aaPredicted RBP6.93□□□□□ -1.3
ERBB2-216ENST00000584014 PAN3Q58A45 887 aaKnown RBP6.93□□□□□ -1.3
ERBB2-216ENST00000584014 SPIN3Q5JUX0 258 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 NKAPLQ5M9Q1 402 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 CD276Q5ZPR3 534 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 BTNL3Q6UXE8 466 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 TRAPPC6BQ86SZ2 158 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 CDH26Q8IXH8 852 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 ZNF561Q8N587 486 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 TPRX1Q8N7U7 411 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 TMEM104Q8NE00 496 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 OR4S1Q8NGB4 309 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 OR51D1Q8NGF3 324 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 OR13F1Q8NGS4 319 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 PPP1R35Q8TAP8 253 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 TBC1D15Q8TC07 691 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 PCGF1Q9BSM1 259 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 CST11Q9H112 138 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 C7orf69Q9H7B7 122 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 ZNF581Q9P0T4 197 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 ZNF222Q9UK12 451 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 MED13LQ71F56 2210 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 ZANQ9Y493 2812 aa6.93□□□□□ -1.3
ERBB2-216ENST00000584014 DOCK11Q5JSL3 2073 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 ACANP16112 2415 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 A0A075B6Q4 140 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 IGHV3OR16-10A0A075B7F0 116 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 PPIAL4CA0A0B4J2A2 164 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 A0A0G2JK05 382 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 A0A0G2JMP0 313 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 A0A0X1KG70 313 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 TMEM82A0PJX8 343 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 KIAA1324LA8MWY0 1029 aaPredicted RBP6.92□□□□□ -1.3
ERBB2-216ENST00000584014 INAFM1C9JVW0 142 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 SLC17A2O00624 439 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 LCE2BO14633 110 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 TNFRSF13BO14836 293 aaPredicted RBP6.92□□□□□ -1.3
ERBB2-216ENST00000584014 SLC22A1O15245 554 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 ENSAO43768 121 aaKnown RBP6.92□□□□□ -1.3
ERBB2-216ENST00000584014 FSTL3O95633 263 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 TK1P04183 234 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 UBBP0CG47 229 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 PPIAL4GP0DN37 164 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 RPL5P46777 297 aaKnown RBP6.92□□□□□ -1.3
ERBB2-216ENST00000584014 DVL1P1P54792 670 aaPredicted RBP6.92□□□□□ -1.3
ERBB2-216ENST00000584014 RBM11P57052 281 aaKnown RBP6.92□□□□□ -1.3
ERBB2-216ENST00000584014 ARF6P62330 175 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 PRB3Q04118 309 aaPredicted RBP6.92□□□□□ -1.3
ERBB2-216ENST00000584014 AESQ08117 197 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 C1orf100Q5SVJ3 147 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 ATPAF1Q5TC12 328 aaPredicted RBP6.92□□□□□ -1.3
ERBB2-216ENST00000584014 WDR73Q6P4I2 378 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 ZNF841Q6ZN19 808 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 GDPGP1Q6ZNW5 385 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 TPRA1Q86W33 373 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 PDZD9Q8IXQ8 264 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 PRR18Q8N4B5 295 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 ZBTB8BQ8NAP8 495 aaPredicted RBP6.92□□□□□ -1.3
ERBB2-216ENST00000584014 OR4M2Q8NGB6 313 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 KCNG3Q8TAE7 436 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 RAB40AQ8WXH6 277 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 FAM3DQ96BQ1 224 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 SDSLQ96GA7 329 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 MRI1Q9BV20 369 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 DNTTIP1Q9H147 329 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 KAAG1Q9UBP8 84 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 STEAP1Q9UHE8 339 aa6.92□□□□□ -1.3
ERBB2-216ENST00000584014 TRAV39A0A0B4J263 110 aa6.91□□□□□ -1.3
ERBB2-216ENST00000584014 IGHV2-70DA0A0C4DH43 119 aa6.91□□□□□ -1.3
ERBB2-216ENST00000584014 TMEM272A0A1B0GTI8 110 aa6.91□□□□□ -1.3
ERBB2-216ENST00000584014 UBE2QL1A1L167 161 aa6.91□□□□□ -1.3
ERBB2-216ENST00000584014 IFITM5A6NNB3 132 aa6.91□□□□□ -1.3
ERBB2-216ENST00000584014 NOTOA8MTQ0 251 aa6.91□□□□□ -1.3
ERBB2-216ENST00000584014 C22orf46C9J442 243 aa6.91□□□□□ -1.3
ERBB2-216ENST00000584014 MCRIP1C9JLW8 97 aa6.91□□□□□ -1.3
ERBB2-216ENST00000584014 K7N7A8 449 aa6.91□□□□□ -1.3
ERBB2-216ENST00000584014 SLC33A1O00400 549 aaPredicted RBP6.91□□□□□ -1.3
ERBB2-216ENST00000584014 PSPNO60542 156 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms