RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 COL10A1Q03692 680 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 TAF9Q16594 264 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 CD177Q8N6Q3 437 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 SAMD12Q8N8I0 201 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 OR8B3Q8NGG8 313 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 OR5D13Q8NGL4 314 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 CLDND2Q8NHS1 167 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 PPP1R35Q8TAP8 253 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 PHF21AQ96BD5 680 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 SLC25A38Q96DW6 304 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 NEIL1Q96FI4 390 aaPredicted RBP9.72□□□□□ -0.85
CDRT1-207ENST00000583965 SNX22Q96L94 193 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 Q96MF0 132 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 OR8B2Q96RD0 313 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 CCL13Q99616 98 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 NUDT16L1Q9BRJ7 211 aaKnown RBP9.72□□□□□ -0.85
CDRT1-207ENST00000583965 FAM234AQ9H0X4 552 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 ATG5Q9H1Y0 275 aa9.72□□□□□ -0.85
CDRT1-207ENST00000583965 RCC2Q9P258 522 aaKnown RBP9.72□□□□□ -0.85
CDRT1-207ENST00000583965 FLNAP21333 2647 aaKnown RBP9.72□□□□□ -0.85
CDRT1-207ENST00000583965 ZANQ9Y493 2812 aa9.71□□□□□ -0.85
CDRT1-207ENST00000583965 OTOGQ6ZRI0 2925 aa9.71□□□□□ -0.85
CDRT1-207ENST00000583965 CELSR1Q9NYQ6 3014 aa9.71□□□□□ -0.85
CDRT1-207ENST00000583965 A0A0A6YYD4 124 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 K7N7A8 449 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 SLC33A1O00400 549 aaPredicted RBP9.71□□□□□ -0.86
CDRT1-207ENST00000583965 GPR37O15354 613 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 NDUFB3O43676 98 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 PDCD6O75340 191 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 IGHV2-5P01817 119 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 WNT2P09544 360 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 USF1P22415 310 aaPredicted RBP9.71□□□□□ -0.86
CDRT1-207ENST00000583965 BLVRBP30043 206 aaPredicted RBP9.71□□□□□ -0.86
CDRT1-207ENST00000583965 TALDO1P37837 337 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 MNDAP41218 407 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 CEBPDP49716 269 aaPredicted RBP9.71□□□□□ -0.86
CDRT1-207ENST00000583965 VEGFCP49767 419 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 SCN1BQ07699 218 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 LOXL1Q08397 574 aaPredicted RBP9.71□□□□□ -0.86
CDRT1-207ENST00000583965 PLA2G7Q13093 441 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 ARL6IP1Q15041 203 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 C11orf91Q3C1V1 193 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 LRRC10Q5BKY1 277 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 FAM131AQ6UXB0 335 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 LYPD2Q6UXB3 125 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 ASCC1Q8N9N2 400 aaKnown RBP9.71□□□□□ -0.86
CDRT1-207ENST00000583965 S100A16Q96FQ6 103 aaKnown RBP9.71□□□□□ -0.86
CDRT1-207ENST00000583965 NEDD4LQ96PU5 975 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 NICN1Q9BSH3 213 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 NARFLQ9H6Q4 476 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 DIABLOQ9NR28 239 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 EXTL2Q9UBQ6 330 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 HSF4Q9ULV5 492 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 MAB21L2Q9Y586 359 aa9.71□□□□□ -0.86
CDRT1-207ENST00000583965 A0A096LNT2 108 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 TRAV24A0A0B4J272 114 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 IGHV4-61A0A0C4DH41 118 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 FOXI3A8MTJ6 420 aaPredicted RBP9.7□□□□□ -0.86
CDRT1-207ENST00000583965 FAM25AB3EWG3 89 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 FAM25CB3EWG5 89 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 FAM25GB3EWG6 89 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 MCRIP1C9JLW8 97 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 RAB27BO00194 218 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 SIRPB1O00241 398 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 SOCS1O15524 211 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 ZNF737O75373 536 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 TK1P04183 234 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 CSN2P05814 226 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 CHATP28329 748 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 LMO4P61968 165 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 IFITM3Q01628 133 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 PAX5Q02548 391 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 RBM39Q14498 530 aaKnown RBP9.7□□□□□ -0.86
CDRT1-207ENST00000583965 PDCD1Q15116 288 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 ESCO2Q56NI9 601 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 PAN3Q58A45 887 aaKnown RBP9.7□□□□□ -0.86
CDRT1-207ENST00000583965 ATAD3CQ5T2N8 411 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 SIGIRRQ6IA17 410 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 PYHIN1Q6K0P9 492 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 C17orf107Q6ZR85 190 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 CMTM4Q8IZR5 234 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 OR8H2Q8N162 312 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 FAM216BQ8N7L0 139 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 SUMF2Q8NBJ7 301 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 ZNRF1Q8ND25 227 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 OR4M1Q8NGD0 313 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 OR10R2Q8NGX6 335 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 REG4Q9BYZ8 158 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 CTSZQ9UBR2 303 aa9.7□□□□□ -0.86
CDRT1-207ENST00000583965 SLC25A10Q9UBX3 287 aaPredicted RBP9.7□□□□□ -0.86
CDRT1-207ENST00000583965 CSMD1Q96PZ7 3565 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 TMEM82A0PJX8 343 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 FUOMA2VDF0 154 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 DVL1O14640 695 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 MGST3O14880 152 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 CTDSPLO15194 276 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 XRCC3O43542 346 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 PSPNO60542 156 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 ABCA1O95477 2261 aa9.69□□□□□ -0.86
CDRT1-207ENST00000583965 HLA-DQB1P01920 261 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms