RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 UQCC2Q9BRT2 126 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DPAGT1Q9H3H5 408 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 C16orf95Q9H693 158 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 ABCB9Q9NP78 766 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 ABRACLQ9P1F3 81 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 DUX4Q9UBX2 424 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 STEAP1Q9UHE8 339 aa16.8■□□□□ 0.28
SRSF1-206ENST00000583741 NOP16Q9Y3C1 178 aaKnown RBP16.8■□□□□ 0.28
SRSF1-206ENST00000583741 IGHV3OR15-7A0A075B7D8 119 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 HTR2CP28335 458 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 RBP2P50120 134 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 FUT6P51993 359 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 CLDN12P56749 244 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 RAB11BQ15907 218 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 CEACAM21Q3KPI0 293 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 MZT2AQ6P582 158 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 LHFPL2Q6ZUX7 228 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 ZNF671Q8TAW3 534 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 HPSE2Q8WWQ2 592 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 ST8SIA4Q92187 359 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 ITPKCQ96DU7 683 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 LIN7BQ9HAP6 207 aa16.79■□□□□ 0.28
SRSF1-206ENST00000583741 RPUSD1Q9UJJ7 312 aaKnown RBP16.79■□□□□ 0.28
SRSF1-206ENST00000583741 A0A0B4J203 849 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 GRPP07492 148 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 BMXP51813 675 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 MTCP1P56278 107 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 PRB3Q04118 309 aaPredicted RBP16.78■□□□□ 0.28
SRSF1-206ENST00000583741 DYNC1I2Q13409 638 aaKnown RBP16.78■□□□□ 0.28
SRSF1-206ENST00000583741 C2orf68Q2NKX9 166 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 DHRS7BQ6IAN0 325 aaPredicted RBP16.78■□□□□ 0.28
SRSF1-206ENST00000583741 RNF144BQ7Z419 303 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 OR8S1Q8NH09 359 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 OR5P3Q8WZ94 311 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 CNTD2Q9H8S5 307 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 ZNRD1Q9P1U0 126 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 COMMD3Q9UBI1 195 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 VPREB3Q9UKI3 123 aa16.78■□□□□ 0.28
SRSF1-206ENST00000583741 NBEAL2Q6ZNJ1 2754 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 A6NLC8 198 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 RGS5O15539 181 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 ECDO95905 644 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-206ENST00000583741 LHBP01229 141 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 SNRPBP14678 240 aaKnown RBP16.77■□□□□ 0.28
SRSF1-206ENST00000583741 ATP1B3P54709 279 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 P2RY14Q15391 338 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 TEX36Q5VZQ5 186 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 OR5A2Q8NGI9 324 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 OR4D6Q8NGJ1 314 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 RFT1Q96AA3 541 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 TSC22D3Q99576 134 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 KAAG1Q9UBP8 84 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 FAM96BQ9Y3D0 163 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 PEX16Q9Y5Y5 336 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 KPTNQ9Y664 436 aa16.77■□□□□ 0.28
SRSF1-206ENST00000583741 PLXNB1O43157 2135 aa16.77■□□□□ 0.27
SRSF1-206ENST00000583741 IGKV1-27A0A075B6S5 117 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 hCG_1807616A0A1W2PRN6 198 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 PQLC2LA1A4F0 135 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 OR5B21A6NL26 309 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 CTDSP2O14595 271 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 TSPAN9O75954 239 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 PAHP00439 452 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 CALCBP10092 127 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 S100A5P33763 92 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 GPM6AP51674 278 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 DLX1P56177 255 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 C11orf91Q3C1V1 193 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 CRIP3Q6Q6R5 217 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 OR5D18Q8NGL1 313 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 OR6Q1Q8NGQ2 317 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 LGALS14Q8TCE9 139 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 RNF170Q96K19 258 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 MICU1Q9BPX6 476 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 RTL8AQ9BWD3 113 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 FGF23Q9GZV9 251 aaPredicted RBP16.76■□□□□ 0.27
SRSF1-206ENST00000583741 ONECUT1Q9UBC0 465 aa16.76■□□□□ 0.27
SRSF1-206ENST00000583741 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.75■□□□□ 0.27
SRSF1-206ENST00000583741 ZNF732B4DXR9 585 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 G3V4G9 280 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 CSF1P09603 554 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 RANBP1P43487 201 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 OR3A4PP47883 348 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 SCAND1P57086 179 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 BEAN1Q3B7T3 259 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 FBLN7Q53RD9 439 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 HIST2H2BDQ6DRA6 164 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 AWAT2Q6E213 333 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 ANGPTL5Q86XS5 388 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 LY6G5BQ8NDX9 201 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 OR51D1Q8NGF3 324 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 FAM3DQ96BQ1 224 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 SIRT7Q9NRC8 400 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 SPATA2Q9UM82 520 aa16.75■□□□□ 0.27
SRSF1-206ENST00000583741 MRPS28Q9Y2Q9 187 aaKnown RBP16.75■□□□□ 0.27
SRSF1-206ENST00000583741 KMT2CQ8NEZ4 4911 aaKnown RBP16.75■□□□□ 0.27
SRSF1-206ENST00000583741 FBP1P09467 338 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 ARSBP15848 533 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 CAPZA1P52907 286 aa16.74■□□□□ 0.27
SRSF1-206ENST00000583741 GNG3P63215 75 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms