RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.8□□□□□ -0.52
GGA3-214ENST00000582717 C20orf196Q8IYI0 205 aa11.8□□□□□ -0.52
GGA3-214ENST00000582717 LGI3Q8N145 548 aa11.8□□□□□ -0.52
GGA3-214ENST00000582717 NPRL2Q8WTW4 380 aa11.8□□□□□ -0.52
GGA3-214ENST00000582717 RTN4IP1Q8WWV3 396 aaPredicted RBP11.8□□□□□ -0.52
GGA3-214ENST00000582717 C18orf12Q96KH6 178 aa11.8□□□□□ -0.52
GGA3-214ENST00000582717 LYZL4Q96KX0 146 aa11.8□□□□□ -0.52
GGA3-214ENST00000582717 SIGLEC12Q96PQ1 595 aa11.8□□□□□ -0.52
GGA3-214ENST00000582717 SF3B5Q9BWJ5 86 aaKnown RBP11.8□□□□□ -0.52
GGA3-214ENST00000582717 TREM2Q9NZC2 230 aa11.8□□□□□ -0.52
GGA3-214ENST00000582717 HSF4Q9ULV5 492 aa11.8□□□□□ -0.52
GGA3-214ENST00000582717 KNTC1P50748 2209 aa11.8□□□□□ -0.52
GGA3-214ENST00000582717 ZNF716A6NP11 495 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 NEURL1O76050 574 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 OR13C7P0DN81 318 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 GUCA1AP43080 201 aaPredicted RBP11.79□□□□□ -0.52
GGA3-214ENST00000582717 CDX1P47902 265 aaPredicted RBP11.79□□□□□ -0.52
GGA3-214ENST00000582717 FHITP49789 147 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 HIKESHIQ53FT3 197 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 PLXDC2Q6UX71 529 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 OR10D3Q8NH80 312 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 HES7Q9BYE0 225 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 IL17BQ9UHF5 180 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 TMED3Q9Y3Q3 217 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 A0A087WWC5 75 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 GABRR1P24046 479 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 HIST1H3AP68431 136 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 OR2B11Q5JQS5 317 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 HIST2H3PS2Q5TEC6 136 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 FBXW12Q6X9E4 464 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 GJC3Q8NFK1 279 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 OR2V1Q8NHB1 315 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 FAM213BQ8TBF2 198 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 MUCL1Q96DR8 90 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 SYT3Q9BQG1 590 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 SH3BGRL3Q9H299 93 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 TTC28Q96AY4 2481 aa11.79□□□□□ -0.52
GGA3-214ENST00000582717 ARID1AO14497 2285 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 C1QL1O75973 258 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 TNFSF15O95150 251 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 DIRAS3O95661 229 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 FAHP16930 419 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 S100A2P29034 98 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 PPP1CCP36873 323 aaKnown RBP11.78□□□□□ -0.52
GGA3-214ENST00000582717 GFRA1P56159 465 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 ZNF266Q14584 549 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 GNMTQ14749 295 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 RSPO1Q2MKA7 263 aaPredicted RBP11.78□□□□□ -0.52
GGA3-214ENST00000582717 DCAF10Q5QP82 559 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 NCMAPQ5T1S8 102 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 ABLIM2Q6H8Q1 611 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 CLEC9AQ6UXN8 241 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 DTX1Q86Y01 620 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 HSD17B11Q8NBQ5 300 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 BCO1Q9HAY6 547 aa11.78□□□□□ -0.52
GGA3-214ENST00000582717 MRPS18CQ9Y3D5 142 aaKnown RBP11.78□□□□□ -0.52
GGA3-214ENST00000582717 PUS1Q9Y606 427 aaKnown RBP eCLIP11.78□□□□□ -0.52
GGA3-214ENST00000582717 ZNF850A8MQ14 1090 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 XRCC2O43543 280 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 SLC34A2O95436 690 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 RPS10P46783 165 aaKnown RBP11.77□□□□□ -0.52
GGA3-214ENST00000582717 ABHD17BQ5VST6 288 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 TMEM182Q6ZP80 229 aaPredicted RBP11.77□□□□□ -0.52
GGA3-214ENST00000582717 LYZL2Q7Z4W2 148 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 TOMM40LQ969M1 308 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 INTS12Q96CB8 462 aaKnown RBP11.77□□□□□ -0.52
GGA3-214ENST00000582717 ZNF845Q96IR2 970 aaPredicted RBP11.77□□□□□ -0.52
GGA3-214ENST00000582717 HDHD3Q9BSH5 251 aaPredicted RBP11.77□□□□□ -0.52
GGA3-214ENST00000582717 METTL9Q9H1A3 318 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 ZDHHC8Q9ULC8 765 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 BOKQ9UMX3 212 aaPredicted RBP11.77□□□□□ -0.52
GGA3-214ENST00000582717 PIGLQ9Y2B2 252 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 RTTNQ86VV8 2226 aa11.77□□□□□ -0.52
GGA3-214ENST00000582717 MED13Q9UHV7 2174 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 RBFOX3A6NFN3 312 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 F5H5K5 113 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 CELA3AP09093 270 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 DBHP09172 617 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 ITGA3P26006 1051 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 HAAOP46952 286 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 UCP3P55916 312 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 SRPXP78539 464 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 SP6Q3SY56 376 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 CCDC71LQ8N9Z2 235 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 OR2M7Q8NG81 312 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 SPSB1Q96BD6 273 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 MSI2Q96DH6 328 aaKnown RBP11.77□□□□□ -0.53
GGA3-214ENST00000582717 SLC2A9Q9NRM0 540 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 KIAA1456Q9P272 454 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 PCNX2A6NKB5 2137 aa11.77□□□□□ -0.53
GGA3-214ENST00000582717 TRBV23-1A0A0A0MS06 115 aa11.76□□□□□ -0.53
GGA3-214ENST00000582717 CXorf65A6NEN9 183 aa11.76□□□□□ -0.53
GGA3-214ENST00000582717 MRPS34P82930 218 aaKnown RBP11.76□□□□□ -0.53
GGA3-214ENST00000582717 RSPO4Q2I0M5 234 aaPredicted RBP11.76□□□□□ -0.53
GGA3-214ENST00000582717 PIGTQ969N2 578 aa11.76□□□□□ -0.53
GGA3-214ENST00000582717 ALKBH3Q96Q83 286 aaPredicted RBP11.76□□□□□ -0.53
GGA3-214ENST00000582717 FAM173AQ9BQD7 235 aa11.76□□□□□ -0.53
GGA3-214ENST00000582717 LIME1Q9H400 295 aa11.76□□□□□ -0.53
GGA3-214ENST00000582717 ZNF703Q9H7S9 590 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms