RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PP6455Q8WZ26 134 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 TMED9Q9BVK6 235 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 FUNDC2Q9BWH2 189 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 RANBP3Q9H6Z4 567 aaPredicted RBP16.99■□□□□ 0.31
CCDC42-203ENST00000581598 RAB18Q9NP72 206 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 MTCH1Q9NZJ7 389 aa16.99■□□□□ 0.31
CCDC42-203ENST00000581598 FAM90A8PA6NJQ4 464 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 GADD45AP24522 165 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 KIR2DS4P43632 304 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 COL10A1Q03692 680 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 CNN3Q15417 329 aaKnown RBP16.98■□□□□ 0.31
CCDC42-203ENST00000581598 PDLIM3Q53GG5 364 aaPredicted RBP16.98■□□□□ 0.31
CCDC42-203ENST00000581598 C11orf88Q6PI97 169 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 UNQ9370/PRO34162Q6UXP9 181 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 BATF2Q8N1L9 274 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 DNAAF1Q8NEP3 725 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 OR51A4Q8NGJ6 313 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 TMEM203Q969S6 136 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 BORCS8Q96FH0 119 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 STUB1Q9UNE7 303 aa16.98■□□□□ 0.31
CCDC42-203ENST00000581598 TGP01266 2768 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 TRDV1A0A1B0GX56 115 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 LGALS4P56470 323 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 FABP5Q01469 135 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 Q499Y3 187 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 TMEM91Q6ZNR0 172 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 ANKRD13BQ86YJ7 626 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 Q8IYB0 196 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 OR8H2Q8N162 312 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 DTX3Q8N9I9 347 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 THRSPQ92748 146 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 SNX22Q96L94 193 aa16.97■□□□□ 0.31
CCDC42-203ENST00000581598 TRBV5-7A0A0A0MS05 114 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 VGLL3A8MV65 326 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 F8VVB4 439 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 F8VWA3 439 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 GABRPO00591 440 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 GPX5O75715 221 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 FGF9P31371 208 aaPredicted RBP16.96■□□□□ 0.31
CCDC42-203ENST00000581598 BMXP51813 675 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 EFNB2P52799 333 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 MEF2CQ06413 473 aaPredicted RBP16.96■□□□□ 0.31
CCDC42-203ENST00000581598 TIMM50Q3ZCQ8 353 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 ACSM3Q53FZ2 586 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 SLC16A12Q6ZSM3 486 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 UTS2BQ765I0 119 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 ASCC1Q8N9N2 400 aaKnown RBP16.96■□□□□ 0.31
CCDC42-203ENST00000581598 PPP1R35Q8TAP8 253 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 PHYHIPQ92561 330 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 RBM38Q9H0Z9 239 aaKnown RBP16.96■□□□□ 0.31
CCDC42-203ENST00000581598 OR51E2Q9H255 320 aa16.96■□□□□ 0.31
CCDC42-203ENST00000581598 TBL2Q9Y4P3 447 aaKnown RBP16.96■□□□□ 0.31
CCDC42-203ENST00000581598 VWFP04275 2813 aa16.96■□□□□ 0.3
CCDC42-203ENST00000581598 TET2Q6N021 2002 aaPredicted RBP16.96■□□□□ 0.3
CCDC42-203ENST00000581598 ODF3BA8MYP8 253 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 GABARAPO95166 117 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 ZNF728P0DKX0 622 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 COX7A1P24310 79 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 RBP2P50120 134 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 INSL4Q14641 139 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 LY6EQ16553 131 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 C2orf68Q2NKX9 166 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 GPR107Q5VW38 600 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 SLC25A26Q70HW3 274 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 GDPD3Q7L5L3 318 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 OR11H6Q8NGC7 330 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 OR4C13Q8NGP0 309 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 OR13D1Q8NGV5 346 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 PIFOQ8TCI5 191 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 SLAMF9Q96A28 289 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 DERL3Q96Q80 235 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 OR14A2Q96R54 314 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 NOTCH1P46531 2555 aa16.95■□□□□ 0.3
CCDC42-203ENST00000581598 DPPA5A6NC42 116 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 H3BSH0 61 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 AIREO43918 545 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 OCM2P0CE71 109 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 MAPK3P27361 379 aaPredicted RBP16.94■□□□□ 0.3
CCDC42-203ENST00000581598 ATP1B3P54709 279 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 HERPUD1Q15011 391 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 ZNF782Q6ZMW2 699 aaPredicted RBP16.94■□□□□ 0.3
CCDC42-203ENST00000581598 PARP16Q8N5Y8 322 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 OR13C3Q8NGS6 347 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 TSEN15Q8WW01 171 aaKnown RBP16.94■□□□□ 0.3
CCDC42-203ENST00000581598 FOXRED1Q96CU9 486 aaPredicted RBP16.94■□□□□ 0.3
CCDC42-203ENST00000581598 ADAT3Q96EY9 351 aaPredicted RBP16.94■□□□□ 0.3
CCDC42-203ENST00000581598 NAA50Q9GZZ1 169 aaKnown RBP16.94■□□□□ 0.3
CCDC42-203ENST00000581598 SSR3Q9UNL2 185 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 DHDHQ9UQ10 334 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 CEPT1Q9Y6K0 416 aa16.94■□□□□ 0.3
CCDC42-203ENST00000581598 IGKV1-9A0A0C4DH69 117 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 SMIM31A0A1B0GVY4 71 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 TMEM82A0PJX8 343 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 PIN1P1O15428 100 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 UCHL1P09936 223 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 IGHV1-8P0DP01 117 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 PRKACBP22694 351 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 EDDM3BP56851 147 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 ZNF146Q15072 292 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 ZNF626Q68DY1 528 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms