RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ITPR3Q14573 2671 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 TRBV23-1A0A0A0MS06 115 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 TRAV24A0A0B4J272 114 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 RAB27BO00194 218 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 SLC33A1O00400 549 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-203ENST00000580986 DVL1O14640 695 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 MGST3O14880 152 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 DEGS1O15121 323 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 NDUFB3O43676 98 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 PSPNO60542 156 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 FOXH1O75593 365 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 PAHP00439 452 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 APOA1P02647 267 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 TK1P04183 234 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 ZNF44P15621 663 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 FUT3P21217 361 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 CHATP28329 748 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 GABRA2P47869 451 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 GMFBP60983 142 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 COL10A1Q03692 680 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 RBM39Q14498 530 aaKnown RBP8.64□□□□□ -1.03
CCDC47-203ENST00000580986 TAF9Q16594 264 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 UBE2NLQ5JXB2 153 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 CD276Q5ZPR3 534 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 WDR25Q64LD2 544 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-203ENST00000580986 SIGIRRQ6IA17 410 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 OR10K2Q6IF99 312 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 LYPD2Q6UXB3 125 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 GAPTQ8N292 157 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 C19orf18Q8NEA5 215 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 OR5T2Q8NGG2 359 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 C8orf46Q8TAG6 207 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 SLC25A38Q96DW6 304 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 COX4I2Q96KJ9 171 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 CCL13Q99616 98 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 SSBP3Q9BWW4 388 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-203ENST00000580986 SHARPINQ9H0F6 387 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 SLC25A10Q9UBX3 287 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-203ENST00000580986 CLN8Q9UBY8 286 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 OR14J1Q9UGF5 321 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 MYO9AB2RTY4 2548 aa8.64□□□□□ -1.03
CCDC47-203ENST00000580986 CR1P17927 2039 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 A0A0A6YYD4 124 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 A0A0B4J203 849 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 FUOMA2VDF0 154 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 SERPINE3A8MV23 424 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 B4DSR2 109 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 FOSL1P15407 271 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 GATA3P23771 443 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 RBMXP38159 391 aaKnown RBP8.63□□□□□ -1.03
CCDC47-203ENST00000580986 OR3A1P47881 315 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 GZMKP49863 264 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 GNB2P62879 340 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 MEF2CQ06413 473 aaPredicted RBP8.63□□□□□ -1.03
CCDC47-203ENST00000580986 LINC00299Q6ZSB3 139 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 BATF2Q8N1L9 274 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 FAM216BQ8N7L0 139 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 ASCC1Q8N9N2 400 aaKnown RBP8.63□□□□□ -1.03
CCDC47-203ENST00000580986 ZNRF1Q8ND25 227 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 DACT3Q96B18 629 aaPredicted RBP8.63□□□□□ -1.03
CCDC47-203ENST00000580986 NEDD4LQ96PU5 975 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 MMP27Q9H306 513 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 KCNK15Q9H427 330 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 TEX15Q9BXT5 2789 aa8.63□□□□□ -1.03
CCDC47-203ENST00000580986 YLPM1P49750 1951 aaKnown RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 MAP1AP78559 2803 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 TMEM82A0PJX8 343 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 KIAA1324LA8MWY0 1029 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 MCRIP1C9JLW8 97 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 H7C1Q1 480 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 FCN3O75636 299 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 LIPFP07098 398 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 GSTP1P09211 210 aaKnown RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 GABRR1P24046 479 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 DUSP1P28562 367 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 BLVRBP30043 206 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 MNDAP41218 407 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 CEBPDP49716 269 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 VEGFCP49767 419 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 EFNB2P52799 333 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 TMEM50BP56557 158 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 PAX2Q02962 417 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 TMEM249Q2WGJ8 235 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 PAN3Q58A45 887 aaKnown RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 SLC35E4Q6ICL7 350 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 GDPD3Q7L5L3 318 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 ZNF554Q86TJ5 538 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 SUMF2Q8NBJ7 301 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 LY6G5BQ8NDX9 201 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 TMEM185AQ8NFB2 350 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 OR5H6Q8NGV6 325 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 OR10R2Q8NGX6 335 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 RAB3CQ96E17 227 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 S100A16Q96FQ6 103 aaKnown RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 WDFY2Q96P53 400 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 NICN1Q9BSH3 213 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 DCTN5Q9BTE1 182 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 DPCDQ9BVM2 203 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 RIMS4Q9H426 269 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms