RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 GPR37O15354 613 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 IGHV1-69P01742 117 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 RAB3BP20337 219 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 BCL3P20749 454 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 MTNR1BP49286 362 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 SMIM21Q3B7S5 101 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 AWAT2Q6E213 333 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 PDZD9Q8IXQ8 264 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 Q8IYB0 196 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 SAXO1Q8IYX7 474 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 PIP4P2Q8N4L2 257 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 EMG1Q92979 244 aaKnown RBP15.84■□□□□ 0.13
LIMD2-209ENST00000580222 NRIP2Q9BQI9 281 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 WDR13Q9H1Z4 485 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 CNTD2Q9H8S5 307 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 PLGRKTQ9HBL7 147 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 NECAP2Q9NVZ3 263 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 MTCH1Q9NZJ7 389 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 ING4Q9UNL4 249 aa15.84■□□□□ 0.13
LIMD2-209ENST00000580222 MRPS28Q9Y2Q9 187 aaKnown RBP15.84■□□□□ 0.13
LIMD2-209ENST00000580222 DYNC2H1Q8NCM8 4307 aaKnown RBP15.84■□□□□ 0.13
LIMD2-209ENST00000580222 TRAV38-1A0A0B4J264 116 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 IGKV1-12A0A0C4DH73 117 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 NOS1APO75052 506 aaPredicted RBP15.83■□□□□ 0.12
LIMD2-209ENST00000580222 TOX4O94842 621 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 IGKV1D-12P01611 117 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 ACAA1P09110 424 aaPredicted RBP15.83■□□□□ 0.12
LIMD2-209ENST00000580222 PTGFRP43088 359 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 RSU1Q15404 277 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 KCNJ8Q15842 424 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 MICBQ29980 383 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 TEX36Q5VZQ5 186 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 ANKRD13BQ86YJ7 626 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 PXT1Q8NFP0 134 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 LHX4Q969G2 390 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 SEH1LQ96EE3 360 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 GFI1Q99684 422 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 UQCC2Q9BRT2 126 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 RASL12Q9NYN1 266 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 NLKQ9UBE8 527 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 V9GY05 133 aa15.83■□□□□ 0.12
LIMD2-209ENST00000580222 SMIM30A4D0T7 59 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.82■□□□□ 0.12
LIMD2-209ENST00000580222 ENSAO43768 121 aaKnown RBP15.82■□□□□ 0.12
LIMD2-209ENST00000580222 KDM4BO94953 1096 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 GABARAPO95166 117 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 CDRT1O95170 752 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 TGFBR1P36897 503 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 NPBWR2P48146 333 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 PSMD7P51665 324 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 ERVK11-1P61568 191 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 MXD1Q05195 221 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 SLC35E4Q6ICL7 350 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 ACP7Q6ZNF0 438 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 CLVS1Q8IUQ0 354 aaPredicted RBP15.82■□□□□ 0.12
LIMD2-209ENST00000580222 OR4D6Q8NGJ1 314 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 OR6M1Q8NGM8 313 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 WDFY2Q96P53 400 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 NAA50Q9GZZ1 169 aaKnown RBP15.82■□□□□ 0.12
LIMD2-209ENST00000580222 SIRPDQ9H106 197 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 METTL9Q9H1A3 318 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 RBFOX1Q9NWB1 397 aaKnown RBP15.82■□□□□ 0.12
LIMD2-209ENST00000580222 CTSZQ9UBR2 303 aa15.82■□□□□ 0.12
LIMD2-209ENST00000580222 NOL3O60936 208 aaKnown RBP15.81■□□□□ 0.12
LIMD2-209ENST00000580222 FSTL3O95633 263 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 GYPAP02724 150 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 MUC1P15941 1255 aaPredicted RBP15.81■□□□□ 0.12
LIMD2-209ENST00000580222 PRKACAP17612 351 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 HTR2CP28335 458 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 SDC2P34741 201 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 SNU13P55769 128 aaKnown RBP15.81■□□□□ 0.12
LIMD2-209ENST00000580222 OR10A3P58181 314 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 NCS1P62166 190 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 HERPUD1Q15011 391 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 C1orf100Q5SVJ3 147 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 DHRS7BQ6IAN0 325 aaPredicted RBP15.81■□□□□ 0.12
LIMD2-209ENST00000580222 GLIPR1L1Q6UWM5 242 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 SLC16A12Q6ZSM3 486 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 NLRC3Q7RTR2 1065 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 TPRA1Q86W33 373 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 LYPD6Q86Y78 171 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 FAM90A1Q86YD7 464 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 OR10K1Q8NGX5 313 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 C12orf43Q96C57 262 aaKnown RBP15.81■□□□□ 0.12
LIMD2-209ENST00000580222 HES4Q9HCC6 221 aa15.81■□□□□ 0.12
LIMD2-209ENST00000580222 NKX6-3A6NJ46 265 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 F8VVB4 439 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 F8VWA3 439 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 SLC17A2O00624 439 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 FCN3O75636 299 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 HTR3BO95264 441 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 CSTBP04080 98 aaKnown RBP15.8■□□□□ 0.12
LIMD2-209ENST00000580222 CALCBP10092 127 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 SERPINA2P20848 420 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 VBP1P61758 197 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 RAB11BQ15907 218 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 HES5Q5TA89 166 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 DCDC5Q6ZRR9 648 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 FAM58AQ8N1B3 248 aa15.8■□□□□ 0.12
LIMD2-209ENST00000580222 LYG1Q8N1E2 194 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms