RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 MAS1P04201 325 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 CSN2P05814 226 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 HEXAP06865 529 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 MSMBP08118 114 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 HCKP08631 526 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 CALCBP10092 127 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC2A2P11168 524 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 CD99P14209 185 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 RPS2P15880 293 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 GLRA1P23415 457 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 MAPK3P27361 379 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 CALRP27797 417 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 PRDX2P32119 198 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 SDC2P34741 201 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF93P35789 620 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 RPS19P39019 145 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 PITPNBP48739 271 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 POU3F4P49335 361 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 EFNB2P52799 333 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 DVL1P1P54792 670 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 CAV3P56539 151 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM50BP56557 158 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 RBM11P57052 281 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 NCS1P62166 190 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 RPS27AP62979 156 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 COL10A1Q03692 680 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 PAX8Q06710 450 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 IL13RA2Q14627 380 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 CARTPTQ16568 116 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 PIGYQ3MUY2 71 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 KLF17Q5JT82 389 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 SPIN3Q5JUX0 258 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 UTF1Q5T230 341 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 FOXB2Q5VYV0 432 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 OR10K2Q6IF99 312 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 HCP5Q6MZN7 132 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 METAP1DQ6UB28 335 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 ETV3LQ6ZN32 361 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 GDPGP1Q6ZNW5 385 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 ANKRD13BQ86YJ7 626 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 LURAP1LQ8IV03 231 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 MKXQ8IYA7 352 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 C1orf87Q8N0U7 546 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM58AQ8N1B3 248 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 MUC20Q8N307 709 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM89BQ8N5H3 189 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 SPICQ8N5J4 248 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 Q8N7P7 452 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNRF1Q8ND25 227 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 OR4S1Q8NGB4 309 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 OR6M1Q8NGM8 313 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 OR10K1Q8NGX5 313 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 OR51F2Q8NH61 342 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 PLPPR1Q8TBJ4 325 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 TNFAIP8L1Q8WVP5 186 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 TNFRSF14Q92956 283 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC25A38Q96DW6 304 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 AJUBAQ96IF1 538 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 HIST1H2AAQ96QV6 131 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 TBX15Q96SF7 602 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 CCL13Q99616 98 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 GAL3ST1Q99999 423 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 CHCHD6Q9BRQ6 235 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 NICN1Q9BSH3 213 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 DCTN5Q9BTE1 182 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 MRI1Q9BV20 369 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 SIRPDQ9H106 197 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 LPAR5Q9H1C0 372 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 NARFLQ9H6Q4 476 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 ELL3Q9HB65 397 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 C19orf12Q9NSK7 152 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM160Q9NX00 188 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 GFOD1Q9NXC2 390 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 PRR13Q9NZ81 148 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC7A11Q9UPY5 501 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 MRPS28Q9Y2Q9 187 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 POLDIP2Q9Y2S7 368 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 KCNK7Q9Y2U2 307 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 AK6Q9Y3D8 172 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 INSIG2Q9Y5U4 225 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 CEPT1Q9Y6K0 416 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 TENM1Q9UKZ4 2725 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 PLXNB1O43157 2135 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 TRAV20A0A0B4J274 112 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 KIR2DS1A0A191URI9 304 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM272A0A1B0GTI8 110 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 SMIM30A4D0T7 59 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 ISPDA4D126 451 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A10PA6NDY2 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A18PA6NE21 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A16PA6NEW6 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A20PA6NIJ5 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A8PA6NJQ4 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A7PA6NKC0 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A22PA8MWA6 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A12PA8MX19 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A5PA8MXJ8 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM90A23PA8MXZ1 464 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 B4DSR2 109 aa3.1□□□□□ -1.91
SMARCE1-215ENST00000578995 AIPO00170 330 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms