RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 GABRA5P31644 462 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 SOX2P48431 317 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 P2RX3P56373 397 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 RPS11P62280 158 aaKnown RBP eCLIP7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 Q3ZCU0 254 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 DDI2Q5TDH0 399 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 MINOS1Q5TGZ0 78 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 TMEM200BQ69YZ2 307 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 GDPGP1Q6ZNW5 385 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 VMO1Q7Z5L0 202 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 SATL1Q86VE3 508 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 LDLRAD3Q86YD5 345 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 OR4D6Q8NGJ1 314 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 OR10AC1Q8NH08 325 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 KCNG3Q8TAE7 436 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 ZNF596Q8TC21 504 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 DYRK2Q92630 601 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 TNFRSF14Q92956 283 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 MALSU1Q96EH3 234 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 ZNF714Q96N38 554 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 DERL3Q96Q80 235 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 TBX15Q96SF7 602 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 MGLLQ99685 303 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 SSBP4Q9BWG4 385 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 CCDC90BQ9GZT6 254 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 FAM192AQ9GZU8 254 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 RIMS4Q9H426 269 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 TPSG1Q9NRR2 321 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 ZNF69Q9UC07 566 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 PITPNC1Q9UKF7 332 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 GSTK1Q9Y2Q3 226 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 LSM2Q9Y333 95 aaKnown RBP7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 MINOS1-NBL1R4GNA1 71 aa7.05□□□□□ -1.28
PPP4R1-210ENST00000578557 RTTNQ86VV8 2226 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 TRAV40A0A0B4J280 105 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 TMEM89A2RUT3 159 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 ZNF729A6NN14 1252 aaPredicted RBP7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 OOSP1A8MZH6 123 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 NPFFO15130 113 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 RRP9O43818 475 aaKnown RBP7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 OR2H2O95918 312 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 UCHL1P09936 223 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 BCL3P20749 454 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 CEACAM3P40198 252 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 PRRX1P54821 245 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 EDDM3BP56851 147 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 GMFBP60983 142 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 ARL6IP1Q15041 203 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 HSD17B12Q53GQ0 312 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 C11orf88Q6PI97 169 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 HEPN1Q6WQI6 88 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 C17orf107Q6ZR85 190 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 Q6ZS46 218 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 IL17RELQ6ZVW7 336 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 FAM185AQ8N0U4 392 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 BEND2Q8NDZ0 799 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 OR11H6Q8NGC7 330 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 OR52N4Q8NGI2 321 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 GCDHQ92947 438 aaPredicted RBP7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 LHX4Q969G2 390 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 SEH1LQ96EE3 360 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 CNBD2Q96M20 576 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 GHITMQ9H3K2 345 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 LINC00574Q9H8X3 128 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 ELL3Q9HB65 397 aaPredicted RBP7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 VCX3AQ9NNX9 186 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 RBFOX1Q9NWB1 397 aaKnown RBP7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 TAS2R4Q9NYW5 299 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 MGAT4AQ9UM21 535 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 ING4Q9UNL4 249 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 ST3GAL6Q9Y274 331 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 RRP15Q9Y3B9 282 aaKnown RBP7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 SIRT4Q9Y6E7 314 aaPredicted RBP7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 ABCA1O95477 2261 aa7.04□□□□□ -1.28
PPP4R1-210ENST00000578557 TRAV1-2A0A0B4J238 106 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 IGKV1-12A0A0C4DH73 117 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 VGLL3A8MV65 326 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 MCRIP1C9JLW8 97 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 GABRPO00591 440 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 SPRY1O43609 319 aaPredicted RBP7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 ORC5O43913 435 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 LALBAP00709 142 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 IGKV1D-12P01611 117 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 SFTPBP07988 381 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 NPBWR2P48146 333 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 DYNLT3P51808 116 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 UBA52P62987 128 aaKnown RBP7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 TIMM50Q3ZCQ8 353 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 KCTD21Q4G0X4 260 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 C1orf100Q5SVJ3 147 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 STEAP3Q658P3 488 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 XAF1Q6GPH4 301 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 SLC35E4Q6ICL7 350 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 CCDC144NLQ6NUI1 221 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 Q6P435 159 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 CEACAM19Q7Z692 300 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 TPRA1Q86W33 373 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 PHC2Q8IXK0 858 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 JAGN1Q8N5M9 183 aa7.03□□□□□ -1.28
PPP4R1-210ENST00000578557 Q8N7P7 452 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms