RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 FAM25GB3EWG6 89 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 F5H0A9 414 aaPredicted RBP10.09□□□□□ -0.79
IFT20-207ENST00000578547 H7C1Q1 480 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 SMAD7O15105 426 aaKnown RBP10.09□□□□□ -0.79
IFT20-207ENST00000578547 PHF1O43189 567 aaPredicted RBP10.09□□□□□ -0.79
IFT20-207ENST00000578547 PDCD6O75340 191 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 ZNF737O75373 536 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 EIF4EP06730 217 aaKnown RBP10.09□□□□□ -0.79
IFT20-207ENST00000578547 WNT2P09544 360 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A15PP0C7V4 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A13PP0C7W8 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A14PP0C7W9 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A24PP0C7X0 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 OR3A1P47881 315 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 GNB2P62879 340 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 MADCAM1Q13477 382 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 GRK1Q15835 563 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM189A2Q15884 450 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 CNPY1Q3B7I2 92 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 MOGAT2Q3SYC2 334 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 ESCO2Q56NI9 601 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 SIGIRRQ6IA17 410 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 C17orf107Q6ZR85 190 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 C6orf201Q7Z4U5 140 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 CMTM4Q8IZR5 234 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 BPIFB2Q8N4F0 458 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 DTX3Q8N9I9 347 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 SUMF2Q8NBJ7 301 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 OR4S1Q8NGB4 309 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 OR56B1Q8NGI3 324 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 CYYR1Q96J86 154 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 DPCDQ9BVM2 203 aaPredicted RBP10.09□□□□□ -0.79
IFT20-207ENST00000578547 SSBP3Q9BWW4 388 aaPredicted RBP10.09□□□□□ -0.79
IFT20-207ENST00000578547 SPACA1Q9HBV2 294 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 LPAR2Q9HBW0 351 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 KAAG1Q9UBP8 84 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 CLN8Q9UBY8 286 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 PEX16Q9Y5Y5 336 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 MED13LQ71F56 2210 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 UBE2QL1A1L167 161 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 FCN3O75636 299 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 TK1P04183 234 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 FUT3P21217 361 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 CHATP28329 748 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 EDDM3BP56851 147 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 LCN2P80188 198 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 LOXL1Q08397 574 aaPredicted RBP10.08□□□□□ -0.8
IFT20-207ENST00000578547 DYNC1I2Q13409 638 aaKnown RBP10.08□□□□□ -0.8
IFT20-207ENST00000578547 WDR25Q64LD2 544 aaPredicted RBP10.08□□□□□ -0.8
IFT20-207ENST00000578547 ZNF841Q6ZN19 808 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 GDPD3Q7L5L3 318 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 LAX1Q8IWV1 398 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 IZUMO1Q8IYV9 350 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 OR8H2Q8N162 312 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 OR10R2Q8NGX6 335 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 PPP1R35Q8TAP8 253 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 DYRK2Q92630 601 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 RAB3CQ96E17 227 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 ARHGAP5-AS1Q96IT6 56 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 SNX22Q96L94 193 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 IFT22Q9H7X7 185 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 PLEKHJ1Q9NW61 149 aa10.08□□□□□ -0.8
IFT20-207ENST00000578547 RCC2Q9P258 522 aaKnown RBP10.08□□□□□ -0.8
IFT20-207ENST00000578547 FLNAP21333 2647 aaKnown RBP10.08□□□□□ -0.8
IFT20-207ENST00000578547 ACANP16112 2415 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 MEX3AA1L020 520 aaKnown RBP10.07□□□□□ -0.8
IFT20-207ENST00000578547 FAM157AC9JC47 383 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 MCRIP1C9JLW8 97 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 H3BUI4 141 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 K7N7A8 449 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 CTDSP2O14595 271 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 GNB3P16520 340 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 ELK1P19419 428 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 CDK2P24941 298 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 LMO1P25800 156 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 AESQ08117 197 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 PLAC9Q5JTB6 97 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 FAM89BQ8N5H3 189 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 TPRX1Q8N7U7 411 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 OR4M1Q8NGD0 313 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 PLPPR1Q8TBJ4 325 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 RAB40AQ8WXH6 277 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 S100A16Q96FQ6 103 aaKnown RBP10.07□□□□□ -0.8
IFT20-207ENST00000578547 SULT4A1Q9BR01 284 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 FAAP24Q9BTP7 215 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 PECRQ9BY49 303 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 SHARPINQ9H0F6 387 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 FAM234AQ9H0X4 552 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 ABCG5Q9H222 651 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 MIXL1Q9H2W2 232 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 ZMAT3Q9HA38 289 aaKnown RBP10.07□□□□□ -0.8
IFT20-207ENST00000578547 SEBOXQ9HB31 216 aaPredicted RBP10.07□□□□□ -0.8
IFT20-207ENST00000578547 ETAA1Q9NY74 926 aa10.07□□□□□ -0.8
IFT20-207ENST00000578547 FOXI3A8MTJ6 420 aaPredicted RBP10.06□□□□□ -0.8
IFT20-207ENST00000578547 RAB27BO00194 218 aa10.06□□□□□ -0.8
IFT20-207ENST00000578547 MGST3O14880 152 aa10.06□□□□□ -0.8
IFT20-207ENST00000578547 SCGNO76038 276 aa10.06□□□□□ -0.8
IFT20-207ENST00000578547 APOA1P02647 267 aa10.06□□□□□ -0.8
IFT20-207ENST00000578547 HIST1H1DP16402 221 aaKnown RBP10.06□□□□□ -0.8
IFT20-207ENST00000578547 ZFP36P26651 326 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms