RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 HSPB6O14558 160 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 LMO1P25800 156 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 PTGFRP43088 359 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 ARHGDIBP52566 201 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 ZP1P60852 638 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 ATXN7L3Q14CW9 347 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-215ENST00000577085 ARSJQ5FYB0 599 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-215ENST00000577085 MINOS1Q5TGZ0 78 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 Q6ZTK2 550 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 RNF144BQ7Z419 303 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 C8orf59Q8N0T1 100 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-215ENST00000577085 OR4D6Q8NGJ1 314 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 RANBP3Q9H6Z4 567 aaPredicted RBP12.56□□□□□ -0.4
SF3B3-215ENST00000577085 FBLN5Q9UBX5 448 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 ZNF281Q9Y2X9 895 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 MINOS1-NBL1R4GNA1 71 aa12.56□□□□□ -0.4
SF3B3-215ENST00000577085 ODAMA1E959 279 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 H0YJX3 145 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 SLC33A1O00400 549 aaPredicted RBP12.55□□□□□ -0.4
SF3B3-215ENST00000577085 TOR1AO14656 332 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 PEX14O75381 377 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 CSN2P05814 226 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 CDK2P24941 298 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 HTR1DP28221 377 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 GLIPR1P48060 266 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 RAB13P51153 203 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 PAN3Q58A45 887 aaKnown RBP12.55□□□□□ -0.4
SF3B3-215ENST00000577085 PRAMEF5Q5TYX0 476 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 XAF1Q6GPH4 301 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 ABHD12Q8N2K0 398 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 PXT1Q8NFP0 134 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 ZNF596Q8TC21 504 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 SMIM19Q96E16 107 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 CDCA4Q9BXL8 241 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 MMP27Q9H306 513 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 TMEM138Q9NPI0 162 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 TAS2R3Q9NYW6 316 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 OR6C3Q9NZP0 311 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 HSPE1-MOB4S4R3N1 261 aa12.55□□□□□ -0.4
SF3B3-215ENST00000577085 EFCAB10A6NFE3 127 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 GABRPO00591 440 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 HTR3BO95264 441 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 CSTBP04080 98 aaKnown RBP12.54□□□□□ -0.4
SF3B3-215ENST00000577085 ZNF93P35789 620 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-215ENST00000577085 CAPGP40121 348 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 KIR2DS4P43632 304 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 KRTAP10-3P60369 221 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 ADARB1P78563 741 aaKnown RBP12.54□□□□□ -0.4
SF3B3-215ENST00000577085 ST3GAL4Q11206 333 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 C2orf68Q2NKX9 166 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 DDI2Q5TDH0 399 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 ELP2Q6IA86 826 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 Q6P435 159 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 HEPN1Q6WQI6 88 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 RTN4RL2Q86UN3 420 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 DYNAPQ8N1N2 210 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 STX19Q8N4C7 294 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 ZNF565Q8N9K5 539 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 OR51A2Q8NGJ7 313 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 OR52N1Q8NH53 320 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 CAPSLQ8WWF8 208 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 RGP1Q92546 391 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-215ENST00000577085 GHSRQ92847 366 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 BARHL1Q9BZE3 327 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 METTL9Q9H1A3 318 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 PAK1IP1Q9NWT1 392 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-215ENST00000577085 CLEC2DQ9UHP7 191 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 ING4Q9UNL4 249 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 TCF19Q9Y242 345 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 SIGLEC9Q9Y336 463 aa12.54□□□□□ -0.4
SF3B3-215ENST00000577085 MEIKINA0A087WXM9 373 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 FAM172BPA6NC97 362 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 MYL12BO14950 172 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 OGG1O15527 345 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 CHST1O43916 411 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 ALDOBP05062 364 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 VSIG10L2P0DP72 767 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 BDKRB2P30411 391 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 CEACAM3P40198 252 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 GLP1RP43220 463 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 TAS2R43P59537 309 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 RIPK1Q13546 671 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 YIF1BQ5BJH7 314 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 TMEM219Q86XT9 240 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 OR10K1Q8NGX5 313 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 PIFOQ8TCI5 191 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 CORO2AQ92828 525 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 PCDHB16Q9NRJ7 776 aa12.53□□□□□ -0.4
SF3B3-215ENST00000577085 ZNF729A6NN14 1252 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-215ENST00000577085 MMP23AO75900 390 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 CDRT1O95170 752 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 NFYBP25208 207 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 C21orf33P30042 268 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-215ENST00000577085 BRS3P32247 399 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 OR3A4PP47883 348 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 DYNLT3P51808 116 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 PRRX1P54821 245 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 RBM39Q14498 530 aaKnown RBP12.52□□□□□ -0.41
SF3B3-215ENST00000577085 IL13RA2Q14627 380 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms