RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 PNLIPRP3Q17RR3 467 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 C16orf89Q6UX73 402 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 DHFR2Q86XF0 187 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 FOXRED2Q8IWF2 684 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 DNAAF1Q8NEP3 725 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 OR9G1Q8NH87 305 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 RPEQ96AT9 228 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 C10orf35Q96D05 121 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 BORCS8Q96FH0 119 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 COQ2Q96H96 371 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 CNN2Q99439 309 aaKnown RBP7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 MNTQ99583 582 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 PLEKHA1Q9HB21 404 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 HMG20AQ9NP66 347 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 ARL8BQ9NVJ2 186 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 NDE1Q9NXR1 346 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 TVP23BQ9NYZ1 205 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 TAGLN3Q9UI15 199 aa7.81□□□□□ -1.16
CALCOCO2-227ENST00000575560 IGKV1-9A0A0C4DH69 117 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 KBTBD11-OT1A0A1B0GTJ5 212 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 ZNF729A6NN14 1252 aaPredicted RBP7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 J3QR06 171 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 AP4M1O00189 453 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 CCRL2O00421 344 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 SYT7O43581 403 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 SERPINA3P01011 423 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 PRKACGP22612 351 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 ATP1B3P54709 279 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 SNU13P55769 128 aaKnown RBP7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 EFNB1P98172 346 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 PDZK1IP1Q13113 114 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 FOXE3Q13461 319 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 FHL3Q13643 280 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 EBI3Q14213 229 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 DIAPH2-AS1Q14236 149 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 TRIM25Q14258 630 aaKnown RBP7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 HES1Q14469 280 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 ODF4Q2M2E3 257 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 ZNF260Q3ZCT1 412 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 MEPCEQ7L2J0 689 aaKnown RBP7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 CATSPERDQ86XM0 798 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 SLC35F2Q8IXU6 374 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 HS3ST5Q8IZT8 346 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 CCDC54Q8NEL0 328 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 TOMM40LQ969M1 308 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 KIRREL1Q96J84 757 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 TEX12Q9BXU0 123 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 COMMD4Q9H0A8 199 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 ABCG5Q9H222 651 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 LINC00574Q9H8X3 128 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 ZNF556Q9HAH1 456 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 ADGRL4Q9HBW9 690 aa7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 EXOSC4Q9NPD3 245 aaKnown RBP7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 SIRT4Q9Y6E7 314 aaPredicted RBP7.8□□□□□ -1.16
CALCOCO2-227ENST00000575560 IGKV1-12A0A0C4DH73 117 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 H3BSH0 61 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 PRKYO43930 277 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 SNX3O60493 162 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 RPP14O95059 124 aaKnown RBP7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 CYB5AP00167 134 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 IGKV1D-33P01593 117 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 IGKV1-33P01594 117 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 IGKV1D-12P01611 117 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 ELANEP08246 267 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 NFYBP25208 207 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 GPR12P47775 334 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 RAB7AP51149 207 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 INSL3P51460 131 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 MTCP1P56278 107 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 CFHR3Q02985 330 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 MADCAM1Q13477 382 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 GPR50Q13585 617 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 CXorf66Q5JRM2 361 aaPredicted RBP7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 KRBOX4Q5JUW0 171 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 Q6P435 159 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 SSX6Q7RTT6 188 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 BCDIN3DQ7Z5W3 292 aaKnown RBP7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 TGIF2LXQ8IUE1 241 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 OR8H3Q8N146 312 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 C4orf3Q8WVX3 66 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 PP6455Q8WZ26 134 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 HRASLS5Q96KN8 279 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 CITED4Q96RK1 184 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 GON7Q9BXV9 100 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 PALMDQ9NP74 551 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 CLN6Q9NWW5 311 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 OR6C3Q9NZP0 311 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 PSG11Q9UQ72 335 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 GSTK1Q9Y2Q3 226 aa7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 AMMECR1Q9Y4X0 333 aaPredicted RBP7.79□□□□□ -1.16
CALCOCO2-227ENST00000575560 SORL1Q92673 2214 aa7.78□□□□□ -1.16
CALCOCO2-227ENST00000575560 ZNF670-ZNF695F2Z2N8 137 aa7.78□□□□□ -1.16
CALCOCO2-227ENST00000575560 SLC33A1O00400 549 aaPredicted RBP7.78□□□□□ -1.16
CALCOCO2-227ENST00000575560 IGHG4P01861 327 aa7.78□□□□□ -1.16
CALCOCO2-227ENST00000575560 ANXA8P13928 327 aa7.78□□□□□ -1.16
CALCOCO2-227ENST00000575560 POU3F4P49335 361 aa7.78□□□□□ -1.16
CALCOCO2-227ENST00000575560 CRISP1P54107 249 aa7.78□□□□□ -1.16
CALCOCO2-227ENST00000575560 AADACL4Q5VUY2 407 aa7.78□□□□□ -1.16
CALCOCO2-227ENST00000575560 ARHGAP24Q8N264 748 aa7.78□□□□□ -1.16
CALCOCO2-227ENST00000575560 PRSS35Q8N3Z0 413 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms