RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ODAMA1E959 279 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 GABRPO00591 440 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 OGG1O15527 345 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 IGLV1-47P01700 117 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 AESQ08117 197 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 DOC2BQ14184 412 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 PRAMEF5Q5TYX0 476 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 HIST2H2BDQ6DRA6 164 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 RPL22L1Q6P5R6 122 aaKnown RBP14.02□□□□□ -0.17
SMG6-214ENST00000573827 CHST4Q8NCG5 386 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 OR51T1Q8NGJ9 327 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 OR4C13Q8NGP0 309 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 SERTAD4Q9NUC0 356 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 TAS2R4Q9NYW5 299 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.02□□□□□ -0.17
SMG6-214ENST00000573827 FOXJ3Q9UPW0 622 aa14.02□□□□□ -0.17
SMG6-214ENST00000573827 TRAV24A0A0B4J272 114 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 HCKP08631 526 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 TMEM225BP0DP42 221 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 CD34P28906 385 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 SOX2P48431 317 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 MTNR1BP49286 362 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 FAM189A2Q15884 450 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 C17orf58Q2M2W7 97 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 FBLN7Q53RD9 439 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 C11orf88Q6PI97 169 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 TMEM219Q86XT9 240 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 PACRGLQ8N7B6 248 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 ZNF555Q8NEP9 628 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 TSEN15Q8WW01 171 aaKnown RBP14.01□□□□□ -0.17
SMG6-214ENST00000573827 NKX3-1Q99801 234 aaPredicted RBP14.01□□□□□ -0.17
SMG6-214ENST00000573827 CLEC7AQ9BXN2 247 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 NPFFR1Q9GZQ6 430 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 PPIL3Q9H2H8 161 aaKnown RBP14.01□□□□□ -0.17
SMG6-214ENST00000573827 TAS2R3Q9NYW6 316 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 ZNF581Q9P0T4 197 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 GLS2Q9UI32 602 aa14.01□□□□□ -0.17
SMG6-214ENST00000573827 A0A087X0M5 115 aa14□□□□□ -0.17
SMG6-214ENST00000573827 A0A1B0GX30 115 aa14□□□□□ -0.17
SMG6-214ENST00000573827 OCM2P0CE71 109 aa14□□□□□ -0.17
SMG6-214ENST00000573827 OCMP0CE72 109 aaPredicted RBP14□□□□□ -0.17
SMG6-214ENST00000573827 ZNF44P15621 663 aa14□□□□□ -0.17
SMG6-214ENST00000573827 RAB3AP20336 220 aa14□□□□□ -0.17
SMG6-214ENST00000573827 CDK2P24941 298 aa14□□□□□ -0.17
SMG6-214ENST00000573827 RPS11P62280 158 aaKnown RBP eCLIP14□□□□□ -0.17
SMG6-214ENST00000573827 BDH1Q02338 343 aa14□□□□□ -0.17
SMG6-214ENST00000573827 PAX5Q02548 391 aa14□□□□□ -0.17
SMG6-214ENST00000573827 DYNC1I2Q13409 638 aaKnown RBP14□□□□□ -0.17
SMG6-214ENST00000573827 HABP2Q14520 560 aaPredicted RBP14□□□□□ -0.17
SMG6-214ENST00000573827 HERPUD1Q15011 391 aa14□□□□□ -0.17
SMG6-214ENST00000573827 LRRC36Q1X8D7 754 aa14□□□□□ -0.17
SMG6-214ENST00000573827 DMKNQ6E0U4 476 aaPredicted RBP14□□□□□ -0.17
SMG6-214ENST00000573827 Q6ZS46 218 aa14□□□□□ -0.17
SMG6-214ENST00000573827 KLHDC1Q8N7A1 406 aa14□□□□□ -0.17
SMG6-214ENST00000573827 OR13C5Q8NGS8 318 aa14□□□□□ -0.17
SMG6-214ENST00000573827 GPR148Q8TDV2 347 aa14□□□□□ -0.17
SMG6-214ENST00000573827 FBLIM1Q8WUP2 373 aa14□□□□□ -0.17
SMG6-214ENST00000573827 LINC00574Q9H8X3 128 aa14□□□□□ -0.17
SMG6-214ENST00000573827 NEK6Q9HC98 313 aa14□□□□□ -0.17
SMG6-214ENST00000573827 BABAM2Q9NXR7 383 aa14□□□□□ -0.17
SMG6-214ENST00000573827 HILPDAQ9Y5L2 63 aa14□□□□□ -0.17
SMG6-214ENST00000573827 TET2Q6N021 2002 aaPredicted RBP14□□□□□ -0.17
SMG6-214ENST00000573827 TRGV10A0A0A0MS01 117 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 TRBV5-5A0A0J9YX44 114 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 ALDOBP05062 364 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 GNAO1P09471 354 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 DEFA6Q01524 100 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 ATXN7L3Q14CW9 347 aaPredicted RBP13.99□□□□□ -0.17
SMG6-214ENST00000573827 TTC23Q5W5X9 447 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 ABHD12Q8N2K0 398 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 GGHQ92820 318 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 STMN2Q93045 179 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 TMEM106AQ96A25 262 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 ORAI1Q96D31 301 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 SMIM19Q96E16 107 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 PGLYRP3Q96LB9 341 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 WNT10AQ9GZT5 417 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 NCOR1P1Q9H4R4 102 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 ZNF286AQ9HBT8 521 aa13.99□□□□□ -0.17
SMG6-214ENST00000573827 LY6LH3BQJ8 138 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 CASQ2O14958 399 aaPredicted RBP13.98□□□□□ -0.17
SMG6-214ENST00000573827 DEGS1O15121 323 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 IGFBP3P17936 291 aaPredicted RBP13.98□□□□□ -0.17
SMG6-214ENST00000573827 OR3A4PP47883 348 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 SCN1BQ07699 218 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 IL13RA2Q14627 380 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 RCN1Q15293 331 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 KRBOX4Q5JUW0 171 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 TRAPPC6BQ86SZ2 158 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 OR10K1Q8NGX5 313 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 OR52N1Q8NH53 320 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 OR2T6Q8NHC8 308 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 TNFAIP8L1Q8WVP5 186 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 CYGBQ8WWM9 190 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 GAL3ST2Q9H3Q3 398 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 C8orf4Q9NR00 106 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 IL36GQ9NZH8 169 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 ZNF281Q9Y2X9 895 aa13.98□□□□□ -0.17
SMG6-214ENST00000573827 EXOSC1Q9Y3B2 195 aaKnown RBP13.98□□□□□ -0.17
SMG6-214ENST00000573827 FUOMA2VDF0 154 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms