RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 CD69Q07108 199 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 PDZK1IP1Q13113 114 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 ZNF273Q14593 569 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 TAF9Q16594 264 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 ZSCAN26Q16670 478 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 LRRC36Q1X8D7 754 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 OLFML2AQ68BL7 652 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 C17orf107Q6ZR85 190 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 OR8H2Q8N162 312 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 ZSCAN4Q8NAM6 433 aaPredicted RBP6.05□□□□□ -1.44
NUP88-205ENST00000572809 BEND2Q8NDZ0 799 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 OR52N4Q8NGI2 321 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 OR5D14Q8NGL3 314 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 OR13C9Q8NGT0 318 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 OR5AK2Q8NH90 309 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 APH1BQ8WW43 257 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 SPSB1Q96BD6 273 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 OPALINQ96PE5 141 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 COMMD4Q9H0A8 199 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 MEGF9Q9H1U4 602 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 ZNF696Q9H7X3 374 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 FGF20Q9NP95 211 aaPredicted RBP6.05□□□□□ -1.44
NUP88-205ENST00000572809 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.05□□□□□ -1.44
NUP88-205ENST00000572809 GLS2Q9UI32 602 aa6.05□□□□□ -1.44
NUP88-205ENST00000572809 TRBV2A0A0J9YWF9 115 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 hADV38S2A0JD32 116 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 TMEM212A6NML5 194 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 SH2D1BO14796 132 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 WBP4O75554 376 aaKnown RBP6.04□□□□□ -1.44
NUP88-205ENST00000572809 TUSC2O75896 110 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 ZFPL1O95159 310 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 HAND1O96004 215 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 CCDC159P0C7I6 412 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 LIMS3P0CW19 117 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 LIMS4P0CW20 117 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 ZNF728P0DKX0 622 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 CALCBP10092 127 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 PRKACAP17612 351 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 GABRR1P24046 479 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 DCKP27707 260 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 DUSP1P28562 367 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 TGFBR2P37173 567 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 GTF2A1P52655 376 aaPredicted RBP6.04□□□□□ -1.44
NUP88-205ENST00000572809 SNU13P55769 128 aaKnown RBP6.04□□□□□ -1.44
NUP88-205ENST00000572809 DLX6P56179 175 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 MEF2CQ06413 473 aaPredicted RBP6.04□□□□□ -1.44
NUP88-205ENST00000572809 ZNF146Q15072 292 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 GRK1Q15835 563 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 SMN1Q16637 294 aaKnown RBP6.04□□□□□ -1.44
NUP88-205ENST00000572809 C19orf54Q5BKX5 351 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 ZNF691Q5VV52 312 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 TTC23Q5W5X9 447 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 RNF144BQ7Z419 303 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 DHRSXQ8N5I4 330 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 ZBTB34Q8NCN2 500 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 OR5R1Q8NH85 324 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 LINC01006Q8NI28 216 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 PPP1R35Q8TAP8 253 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 HAVCR2Q8TDQ0 301 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 RFT1Q96AA3 541 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 SPACA5Q96QH8 159 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 SSX3Q99909 188 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 PDCD1LG2Q9BQ51 273 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 RHOFQ9HBH0 211 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 HMG20AQ9NP66 347 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 C8orf4Q9NR00 106 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 RBFOX1Q9NWB1 397 aaKnown RBP6.04□□□□□ -1.44
NUP88-205ENST00000572809 IL36RNQ9UBH0 155 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 VPREB3Q9UKI3 123 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 DHDHQ9UQ10 334 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 GSTK1Q9Y2Q3 226 aa6.04□□□□□ -1.44
NUP88-205ENST00000572809 NBEAL1Q6ZS30 2694 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 IGKV1-12A0A0C4DH73 117 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 IRGMA1A4Y4 181 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 MEX3AA1L020 520 aaKnown RBP6.03□□□□□ -1.44
NUP88-205ENST00000572809 H3BUX3 64 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 MGST3O14880 152 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 MAGEB3O15480 346 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 SULT1B1O43704 296 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 TSPAN9O75954 239 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 KDM4BO94953 1096 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 LY86O95711 162 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 CLIC3O95833 236 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 IGKV1D-12P01611 117 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 HCKP08631 526 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 IGHV1-8P0DP01 117 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 TMEM225BP0DP42 221 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 COX7A1P24310 79 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 LMO1P25800 156 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 ERP29P30040 261 aaKnown RBP6.03□□□□□ -1.44
NUP88-205ENST00000572809 ETV1P50549 477 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 SCN1BQ07699 218 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 SRSF4Q08170 494 aaKnown RBP6.03□□□□□ -1.44
NUP88-205ENST00000572809 EDDM3AQ14507 147 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 KISS1Q15726 138 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 AANATQ16613 207 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 CCDC58Q4VC31 144 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 SPIN3Q5JUX0 258 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 PRR31Q5SQ13 230 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 SLC35E4Q6ICL7 350 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms