RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 EIF5AP63241 154 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 FOXF1Q12946 379 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 NPRL3Q12980 569 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 EXOSC2Q13868 293 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 PLPPR5Q32ZL2 321 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 GLYR1Q49A26 553 aaPredicted RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 TMEM236Q5W0B7 351 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 FBXW9Q5XUX1 488 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 KDM4DQ6B0I6 523 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 GLYATQ6IB77 296 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 HAGHLQ6PII5 290 aaPredicted RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 FAM131AQ6UXB0 335 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 SIGLEC15Q6ZMC9 328 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 C5orf24Q7Z6I8 188 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 ZER1Q7Z7L7 766 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 GTPBP8Q8N3Z3 284 aaPredicted RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 OR7G2Q8NG99 324 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 AGR3Q8TD06 166 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 GPR151Q8TDV0 419 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 ST7LQ8TDW4 575 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 SFT2D1Q8WV19 159 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 RNF138Q8WVD3 245 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 ACOT12Q8WYK0 555 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 RAB8BQ92930 207 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 EXOSC8Q96B26 276 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 CNRIP1Q96F85 164 aaPredicted RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 C5orf30Q96GV9 206 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 NARS2Q96I59 477 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 VSTM2LQ96N03 204 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 CCDC115Q96NT0 180 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 OR5B2Q96R09 309 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 SSX3Q99909 188 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 KCNS3Q9BQ31 491 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 GPR61Q9BZJ8 451 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 CHIAQ9BZP6 476 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 NKX6-2Q9C056 277 aaPredicted RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 GABARAPL1Q9H0R8 117 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 ANKRD19PQ9H560 264 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 TMEM138Q9NPI0 162 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 SLC17A5Q9NRA2 495 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 CNOT2Q9NZN8 540 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 MYEF2Q9P2K5 600 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 BTNL2Q9UIR0 455 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 LAMP5Q9UJQ1 280 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 TBC1D24Q9ULP9 559 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 MGAT4AQ9UM21 535 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 SSR3Q9UNL2 185 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 SAMHD1Q9Y3Z3 626 aaKnown RBP4.32□□□□□ -1.72
SF3B3-214ENST00000572365 U3KQV3 271 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 V9GYQ6 96 aa4.32□□□□□ -1.72
SF3B3-214ENST00000572365 A0A087WYN8 130 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 TMEM210A6NLX4 147 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 A8MVM7 634 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 C1orf196B1AJZ1 125 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 TRAPPC2LH3BP13 241 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 PDCD5O14737 125 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 CHP2O43745 196 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 SAP30O75446 220 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 CST1P01037 141 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 ERCC1P07992 297 aaPredicted RBP4.31□□□□□ -1.72
SF3B3-214ENST00000572365 TSPAN19P0C672 248 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 TSPAN8P19075 237 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 NPR2P20594 1047 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 ATP6V1B2P21281 511 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 PAICSP22234 425 aaKnown RBP4.31□□□□□ -1.72
SF3B3-214ENST00000572365 LCN1P31025 176 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 GABRA3P34903 492 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 HNMTP50135 292 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 P2RY4P51582 365 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 TAS2R39P59534 338 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 BPIFB3P59826 476 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 RAB2AP61019 212 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 NCS1P62166 190 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 C1DQ13901 141 aaKnown RBP4.31□□□□□ -1.72
SF3B3-214ENST00000572365 IMPG1Q17R60 797 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 FAM83EQ2M2I3 478 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 DEFB112Q30KQ8 113 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 KLHL22Q53GT1 634 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 PAN3Q58A45 887 aaKnown RBP4.31□□□□□ -1.72
SF3B3-214ENST00000572365 Q5BKY6 102 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 SAPCD1Q5SSQ6 148 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 OTUD3Q5T2D3 398 aaPredicted RBP4.31□□□□□ -1.72
SF3B3-214ENST00000572365 KPRPQ5T749 579 aaPredicted RBP4.31□□□□□ -1.72
SF3B3-214ENST00000572365 TMEM107Q6UX40 140 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 BRD3OSQ6XYD6 125 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 CNTN4Q8IWV2 1026 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 RIMKLAQ8IXN7 391 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 ENTHD1Q8IYW4 607 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 RNF148Q8N7C7 305 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 OR8J3Q8NGG0 315 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 OR4F5Q8NH21 305 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 LINC01006Q8NI28 216 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 APH1AQ96BI3 265 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 TM4SF18Q96CE8 201 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 MRPL48Q96GC5 212 aaKnown RBP4.31□□□□□ -1.72
SF3B3-214ENST00000572365 LRR1Q96L50 414 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 ZNF681Q96N22 645 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 NEDD4LQ96PU5 975 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 SLC38A2Q96QD8 506 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms