RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 NFYBP25208 207 aa14.02□□□□□ -0.16
RAB40B-206ENST00000571995 EIF5AP63241 154 aaKnown RBP14.02□□□□□ -0.16
RAB40B-206ENST00000571995 JMJD6Q6NYC1 403 aaPredicted RBP14.02□□□□□ -0.16
RAB40B-206ENST00000571995 DPPA2Q7Z7J5 298 aa14.02□□□□□ -0.16
RAB40B-206ENST00000571995 FN3KRPQ9HA64 309 aa14.02□□□□□ -0.16
RAB40B-206ENST00000571995 CCL28Q9NRJ3 127 aa14.02□□□□□ -0.16
RAB40B-206ENST00000571995 KIF25Q9UIL4 384 aa14.02□□□□□ -0.16
RAB40B-206ENST00000571995 EML5Q05BV3 1969 aa14.02□□□□□ -0.16
RAB40B-206ENST00000571995 H0YIZ8 118 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 SRSF10O75494 262 aaKnown RBP14.02□□□□□ -0.17
RAB40B-206ENST00000571995 NHLH2Q02577 135 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 GUCA2BQ16661 112 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 TBC1D28Q2M2D7 210 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 TMEM123Q8N131 208 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 LILRB2Q8N423 598 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 BVESQ8NE79 360 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 OR10J5Q8NHC4 309 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 SLC2A9Q9NRM0 540 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 GNG12Q9UBI6 72 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 IGKV1-27A0A075B6S5 117 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 KRASP01116 189 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 FAM3AP98173 230 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 SPSB1Q96BD6 273 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 HS3ST6Q96QI5 342 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 PROK2Q9HC23 129 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 KCNIP1Q9NZI2 227 aa14.02□□□□□ -0.17
RAB40B-206ENST00000571995 RNF222A6NCQ9 220 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 HAGHQ16775 308 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 RPUSD3Q6P087 351 aaKnown RBP14.01□□□□□ -0.17
RAB40B-206ENST00000571995 CCDC54Q8NEL0 328 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 MARS2Q96GW9 593 aaKnown RBP14.01□□□□□ -0.17
RAB40B-206ENST00000571995 AKR1E2Q96JD6 320 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 TMEM265A0A087WTH1 108 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 LRRC3CA6NJW4 275 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 CDRT15L2A8MXV6 281 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 PDCD6O75340 191 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 CD74P04233 296 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 TUBG1P23258 451 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 ELLP55199 621 aaPredicted RBP14.01□□□□□ -0.17
RAB40B-206ENST00000571995 ZNF816Q0VGE8 651 aaPredicted RBP14.01□□□□□ -0.17
RAB40B-206ENST00000571995 NSUN5P2Q63ZY6 315 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 RGS7BPQ6MZT1 257 aaPredicted RBP14.01□□□□□ -0.17
RAB40B-206ENST00000571995 APOBEC3DQ96AK3 386 aaPredicted RBP14.01□□□□□ -0.17
RAB40B-206ENST00000571995 IGKV1-12A0A0C4DH73 117 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 IGKV1D-12P01611 117 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 PNLIPRP3Q17RR3 467 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 FDCSPQ8NFU4 85 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 SLC26A1Q9H2B4 701 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 NPTNQ9Y639 398 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 RFNGQ9Y644 331 aa14.01□□□□□ -0.17
RAB40B-206ENST00000571995 M0R1B8 84 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 FCGR3AP08637 254 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 NKX2-1P43699 371 aaPredicted RBP14□□□□□ -0.17
RAB40B-206ENST00000571995 TMEM230Q96A57 120 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 NKX6-2Q9C056 277 aaPredicted RBP14□□□□□ -0.17
RAB40B-206ENST00000571995 ZFYVE26Q68DK2 2539 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 NTN3O00634 580 aaPredicted RBP14□□□□□ -0.17
RAB40B-206ENST00000571995 GPR37O15354 613 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 ST8SIA3O43173 380 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 SPRY3O43610 288 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 RHBDL1O75783 438 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 SRSF3P84103 164 aaKnown RBP14□□□□□ -0.17
RAB40B-206ENST00000571995 CLEC12BQ2HXU8 276 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 SPANXN5Q5MJ07 72 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 LGI3Q8N145 548 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 GAPTQ8N292 157 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 NABP1Q96AH0 204 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 PRRX2Q99811 253 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 ANKHD1Q8IWZ3 2542 aaKnown RBP14□□□□□ -0.17
RAB40B-206ENST00000571995 ADAM20O43506 726 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 ATG12O94817 140 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 MPPED2Q15777 294 aa14□□□□□ -0.17
RAB40B-206ENST00000571995 MYO18BQ8IUG5 2567 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 LDLRAD4O15165 306 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 ZNF674Q2M3X9 581 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 BTNL3Q6UXE8 466 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 OR1K1Q8NGR3 316 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 RTBDNQ9BSG5 229 aaPredicted RBP13.99□□□□□ -0.17
RAB40B-206ENST00000571995 NKX2-6A6NCS4 301 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 B4E171 279 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 NEURL1O76050 574 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 CLDN1O95832 211 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 TSPAN7P41732 249 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 PRAMEF6Q5VXH4 476 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 OR52M1Q8NGK5 317 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 SCGB1C1Q8TD33 95 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 SFT2D1Q8WV19 159 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 ALX4Q9H161 411 aaPredicted RBP13.99□□□□□ -0.17
RAB40B-206ENST00000571995 CSPG4Q6UVK1 2322 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 OR6C65A6NJZ3 312 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 LILRA1O75019 489 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 B3GALNT1O75752 331 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 CST2P09228 141 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 TBPP20226 339 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 MPGP29372 298 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 RSPO1Q2MKA7 263 aaPredicted RBP13.99□□□□□ -0.17
RAB40B-206ENST00000571995 RHOFQ9HBH0 211 aa13.99□□□□□ -0.17
RAB40B-206ENST00000571995 OR2Z1Q8NG97 314 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 ISOC2Q96AB3 205 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 SEMA5BQ9P283 1151 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms