RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 BOKQ9UMX3 212 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 PRELID3BQ9Y3B1 194 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 A0A1W2PNU3 283 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 FOXI3A8MTJ6 420 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 XRCC2O43543 280 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 NEURL1O76050 574 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 GP1BAP07359 652 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 NME2P22392 152 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 CDC34P49427 236 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 GPM6AP51674 278 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 SRSF4Q08170 494 aaKnown RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 RBM39Q14498 530 aaKnown RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 PLEKHN1Q494U1 663 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 OR2M7Q8NG81 312 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 CPNE4Q96A23 557 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 ADGRG7Q96K78 797 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 HS3ST6Q96QI5 342 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 SHARPINQ9H0F6 387 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 DEFB127Q9H1M4 99 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 ASCL3Q9NQ33 180 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 MAP1BP46821 2468 aaKnown RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 A0A1W2PRV1 198 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 MED19A0JLT2 244 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 OR6C6A6NF89 314 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 NGFP01138 241 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 FCGR3AP08637 254 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 OR5AC1P0C628 307 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF728P0DKX0 622 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 CBR1P16152 277 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 ACP1P24666 158 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 ASCL1P50553 236 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF133P52736 654 aaPredicted RBP7.57□□□□□ -1.2
LINC00558-201ENST00000569422 PDZK1IP1Q13113 114 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 GGNBP1Q5YKI7 109 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 PRSS54Q6PEW0 395 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 TMEM88Q6PEY1 159 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 DPPA2Q7Z7J5 298 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 IL22RA1Q8N6P7 574 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 CA5BP1Q8WTZ4 195 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 C1orf123Q9NWV4 160 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 COA4Q9NYJ1 87 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 FAM96BQ9Y3D0 163 aa7.57□□□□□ -1.2
LINC00558-201ENST00000569422 CFAP47Q6ZTR5 3102 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 A0A1B0GV50 99 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 A0A1W2PR80 420 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF503-AS2A6NEH8 195 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 F8VVB4 439 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 F8VWA3 439 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 GPR31O00270 319 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 NXPH3O95157 252 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 GFRA1P56159 465 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 MALLQ13021 153 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 SPIN3Q5JUX0 258 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 SPATA46Q5T0L3 261 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 LYZL2Q7Z4W2 148 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 RTN4IP1Q8WWV3 396 aaPredicted RBP7.56□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF488Q96MN9 340 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 BARX1Q9HBU1 254 aaPredicted RBP7.56□□□□□ -1.2
LINC00558-201ENST00000569422 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.56□□□□□ -1.2
LINC00558-201ENST00000569422 GSN-AS1Q9NRJ2 163 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 NECAP2Q9NVZ3 263 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 ANAPC10Q9UM13 185 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 hCG_38984A0A1B0GV85 526 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 FAM74A7A6NL05 159 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 LRP3O75074 770 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 SYNGR4O95473 234 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 IFNA21P01568 189 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 ALDH3B1P43353 468 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 PCBD1P61457 104 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 TGIF1Q15583 401 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 FAM74A3Q4VXF1 159 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 PEAR1Q5VY43 1037 aaPredicted RBP7.56□□□□□ -1.2
LINC00558-201ENST00000569422 TSNAXQ99598 290 aaKnown RBP7.56□□□□□ -1.2
LINC00558-201ENST00000569422 SEPSECSQ9HD40 501 aaKnown RBP7.56□□□□□ -1.2
LINC00558-201ENST00000569422 MED9Q9NWA0 146 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 PARPBPQ9NWS1 579 aa7.56□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF816-ZNF321PA0A0X1KG74 233 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 A0A1B0GV90 55 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 BTBD17A6NE02 478 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 ACTL6AO96019 429 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 CHATP28329 748 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 MEOX2P50222 304 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 VAMP2P63027 116 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 SLAQ13239 276 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 SMCO1Q147U7 214 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF169Q14929 603 aaPredicted RBP7.55□□□□□ -1.2
LINC00558-201ENST00000569422 ABLIM2Q6H8Q1 611 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 TMPRSS7Q7RTY8 843 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 MRPL21Q7Z2W9 205 aaKnown RBP7.55□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF100Q8IYN0 542 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 SUMF1Q8NBK3 374 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 POC1AQ8NBT0 407 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 TTTY12Q9BZ98 90 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 LDAHQ9H6V9 325 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 BCO1Q9HAY6 547 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 CYTL1Q9NRR1 136 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 KCNIP3Q9Y2W7 256 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 K7EPK0 472 aa7.55□□□□□ -1.2
LINC00558-201ENST00000569422 PHF1O43189 567 aaPredicted RBP7.55□□□□□ -1.2
LINC00558-201ENST00000569422 BCL3P20749 454 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms