RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	ETV1	P50549	477 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	BMX	P51813	675 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	SNU13	P55769	128 aa	Known RBP	5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	PROK1	P58294	105 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	KRTAP10-3	P60369	221 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	EDDM3A	Q14507	147 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	KISS1	Q15726	138 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	LY6E	Q16553	131 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	NDUFA5	Q16718	116 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	CCDC58	Q4VC31	144 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	ZNF691	Q5VV52	312 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	SLC35E4	Q6ICL7	350 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	RPL22L1	Q6P5R6	122 aa	Known RBP	5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	TREML4	Q6UXN2	200 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	RNF144B	Q7Z419	303 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	LHFPL4	Q7Z7J7	247 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	SATL1	Q86VE3	508 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	DTX3	Q8N9I9	347 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	OR11H6	Q8NGC7	330 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	OR5D18	Q8NGL1	313 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	CNIH3	Q8TBE1	160 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	TSEN15	Q8WW01	171 aa	Known RBP	5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	ZNF714	Q96N38	554 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	CHST6	Q9GZX3	395 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	TCF7L1	Q9HCS4	588 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	RAB18	Q9NP72	206 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	EXOSC4	Q9NPD3	245 aa	Known RBP	5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	BABAM2	Q9NXR7	383 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	FBLN5	Q9UBX5	448 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	DHDH	Q9UQ10	334 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	TBL2	Q9Y4P3	447 aa	Known RBP	5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	LINC00312	Q9Y6C7	94 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	HSPE1-MOB4	S4R3N1	261 aa		5.61	□□□□□ -1.51
SF3B3-209	ENST00000567635	VWF	P04275	2813 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	hCG_2014768	A0A024R1R8	64 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	TRGV10	A0A0A0MS01	117 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	ODF3B	A8MYP8	253 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635		M0QZ24	198 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	SIRPB1	O00241	398 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	OGG1	O15527	345 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	CLIC3	O95833	236 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	OR2H2	O95918	312 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	CD2	P06729	351 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	GNAO1	P09471	354 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	MYL12A	P19105	171 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	RAB3A	P20336	220 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	PAX6	P26367	422 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	GABRA5	P31644	462 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	KIR2DS4	P43632	304 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	OR3A1	P47881	315 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	MTNR1B	P49286	362 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	RAB13	P51153	203 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	P2RX3	P56373	397 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	AES	Q08117	197 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	SSX2	Q16385	188 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	KCTD21	Q4G0X4	260 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	ZNF626	Q68DY1	528 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	ELP2	Q6IA86	826 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	ASPHD2	Q6ICH7	369 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	OR52W1	Q6IF63	320 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	ZNF529	Q6P280	563 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635		Q6P435	159 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	CRIP3	Q6Q6R5	217 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	TRAPPC6B	Q86SZ2	158 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	C8orf59	Q8N0T1	100 aa	Predicted RBP	5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	TPRX1	Q8N7U7	411 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	CHST4	Q8NCG5	386 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	SETD9	Q8NE22	299 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	PIFO	Q8TCI5	191 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	GPR148	Q8TDV2	347 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	CORO2A	Q92828	525 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	CPNE2	Q96FN4	548 aa	Predicted RBP	5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	GPER1	Q99527	375 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	CDCA4	Q9BXL8	241 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	EXOSC1	Q9Y3B2	195 aa	Known RBP	5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	SESN1	Q9Y6P5	492 aa		5.6	□□□□□ -1.51
SF3B3-209	ENST00000567635	TRIM64C	A6NLI5	447 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635		H3BUI4	141 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	SLC33A1	O00400	549 aa	Predicted RBP	5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	MMP23A	O75900	390 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	TPPP	O94811	219 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	ALDOB	P05062	364 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	CSN2	P05814	226 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	ZNF44	P15621	663 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	PTGFR	P43088	359 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	RPL5	P46777	297 aa	Known RBP	5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	GLIPR1	P48060	266 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	SOX2	P48431	317 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	DYNLT3	P51808	116 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	ZP1	P60852	638 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	ST3GAL4	Q11206	333 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	CDK5R1	Q15078	307 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	RSU1	Q15404	277 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	FAM189A2	Q15884	450 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	PLA1A	Q53H76	456 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	KRBOX4	Q5JUW0	171 aa		5.59	□□□□□ -1.51
SF3B3-209	ENST00000567635	RBM48	Q5RL73	367 aa	Known RBP	5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms