RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 YWHAEP62258 255 aaKnown RBP0.16□□□□□ -2.38
CDH1-211ENST00000567320 RAD51Q06609 339 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 DNAJC3Q13217 504 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 APOFQ13790 326 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 CEACAM21Q3KPI0 293 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 SPANXN2Q5MJ10 180 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 ELP2Q6IA86 826 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 ZIC4Q8N9L1 334 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 FER1L6-AS1Q8NA97 138 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 INO80EQ8NBZ0 244 aaPredicted RBP0.16□□□□□ -2.38
CDH1-211ENST00000567320 TCP10LQ8TDR4 215 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 CMBLQ96DG6 245 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 OR2M4Q96R27 311 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 TSGA10Q9BZW7 698 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 XKR8Q9H6D3 395 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 C6orf50Q9HD87 102 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 DDX18Q9NVP1 670 aaKnown RBP0.16□□□□□ -2.38
CDH1-211ENST00000567320 RPL26L1Q9UNX3 145 aaKnown RBP0.16□□□□□ -2.38
CDH1-211ENST00000567320 ANGPT4Q9Y264 503 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 MRPS16Q9Y3D3 137 aaKnown RBP0.16□□□□□ -2.38
CDH1-211ENST00000567320 HEY1Q9Y5J3 304 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 NYNRINQ9P2P1 1898 aaKnown RBP0.16□□□□□ -2.38
CDH1-211ENST00000567320 USP24Q9UPU5 2620 aa0.16□□□□□ -2.38
CDH1-211ENST00000567320 ROS1P08922 2347 aa0.15□□□□□ -2.38
CDH1-211ENST00000567320 OR2AT4A6NND4 320 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 CD300LBA8K4G0 201 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 HCRTO43612 131 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 CRYGDP07320 174 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 CD36P16671 472 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 ELK4P28324 431 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 IL12BP29460 328 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 HINT1P49773 126 aaPredicted RBP0.15□□□□□ -2.39
CDH1-211ENST00000567320 TSPAN31Q12999 210 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 ACTBL2Q562R1 376 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 BEX5Q5H9J7 111 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 NXNL2Q5VZ03 156 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 NIT1Q86X76 327 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 OR52K1Q8NGK4 314 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 ERMNQ8TAM6 284 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 NDNFQ8TB73 568 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 ZFAND1Q8TCF1 268 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 FMC1Q96HJ9 113 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 OPALINQ96PE5 141 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 PLIN2Q99541 437 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 TIMM21Q9BVV7 248 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 SHCBP1LQ9BZQ2 653 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 VPS37BQ9H9H4 285 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 LYRM4Q9HD34 91 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 TFR2Q9UP52 801 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 CACNA1SQ13698 1873 aa0.15□□□□□ -2.39
CDH1-211ENST00000567320 DENND4BO75064 1496 aaPredicted RBP0.15□□□□□ -2.39
CDH1-211ENST00000567320 USP42Q9H9J4 1324 aaKnown RBP0.14□□□□□ -2.39
CDH1-211ENST00000567320 IGKV1-9A0A0C4DH69 117 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 LRRIQ4A6NIV6 560 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 A8MWP6 167 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 SOD1P00441 154 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 ZNF705DP0CH99 300 aaPredicted RBP0.14□□□□□ -2.39
CDH1-211ENST00000567320 ZNF705BP0CI00 300 aaPredicted RBP0.14□□□□□ -2.39
CDH1-211ENST00000567320 MSR1P21757 451 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 CD82P27701 267 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 RWDD2BP57060 319 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 MLF1P58340 268 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 BNIP2Q12982 314 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 Q499Y3 187 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 ZCWPW2Q504Y3 356 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 TIMM23BQ5SRD1 257 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 FAM201AQ5SY85 155 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 TPRG1LQ5T0D9 272 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 IDNKQ5T6J7 187 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 ZFAND2AQ8N6M9 145 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 SPACA4Q8TDM5 124 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 OR8D1Q8WZ84 308 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 TMBIM1Q969X1 311 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 CLDN23Q96B33 292 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 TMIGD2Q96BF3 282 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 REEP6Q96HR9 211 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 BPIFA3Q9BQP9 254 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 CCDC77Q9BR77 488 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 COA1Q9GZY4 146 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 SLC38A1Q9H2H9 487 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 POMKQ9H5K3 350 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 VCX3AQ9NNX9 186 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 AHSPQ9NZD4 102 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 ZMAT5Q9UDW3 170 aaKnown RBP0.14□□□□□ -2.39
CDH1-211ENST00000567320 FBXL3Q9UKT7 428 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 FLVCR2Q9UPI3 526 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 SLC22A14Q9Y267 594 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 USH1CQ9Y6N9 552 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 ATAD2BQ9ULI0 1458 aa0.14□□□□□ -2.39
CDH1-211ENST00000567320 NOS1P29475 1434 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 MIA3Q5JRA6 1907 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 MICAL3Q7RTP6 2002 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 ARGFXA6NJG6 315 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 A8MUN3 132 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 H3BP45 60 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 TOR1AO14656 332 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 TCAPO15273 167 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 RALBP11234 206 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 PRTN3P24158 256 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 GABRR2P28476 465 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms