RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 OGG1O15527 345 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 TSPAN15O95858 294 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 CSN2P05814 226 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 RPSAP08865 295 aaKnown RBP11.8□□□□□ -0.52
FANCA-220ENST00000566409 ZNF44P15621 663 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 RAB3AP20336 220 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 DYNLT3P51808 116 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 RCN1Q15293 331 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 PRAMEF5Q5TYX0 476 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 ASCL4Q6XD76 172 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 TRAPPC6BQ86SZ2 158 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 PACRGLQ8N7B6 248 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 Q8NFD4 153 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 PXT1Q8NFP0 134 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 OR4P4Q8NGL7 312 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 HAVCR2Q8TDQ0 301 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 FOXRED1Q96CU9 486 aaPredicted RBP11.8□□□□□ -0.52
FANCA-220ENST00000566409 CLEC7AQ9BXN2 247 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 PPIL3Q9H2H8 161 aaKnown RBP11.8□□□□□ -0.52
FANCA-220ENST00000566409 ZNF702PQ9H963 129 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 BABAM2Q9NXR7 383 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 HILPDAQ9Y5L2 63 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 NOTCH3Q9UM47 2321 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 TRAV24A0A0B4J272 114 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 FAM172BPA6NC97 362 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 GNAO1P09471 354 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 CGB3P0DN86 165 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 CGB7P0DN87 165 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 CDK2P24941 298 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 MTNR1BP49286 362 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 DOC2BQ14184 412 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 HABP2Q14520 560 aaPredicted RBP11.79□□□□□ -0.52
FANCA-220ENST00000566409 ATXN7L3Q14CW9 347 aaPredicted RBP11.79□□□□□ -0.52
FANCA-220ENST00000566409 C17orf58Q2M2W7 97 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 MINOS1Q5TGZ0 78 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 TTC23Q5W5X9 447 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 HEPN1Q6WQI6 88 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 LIAT1Q6ZQX7 453 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 SATL1Q86VE3 508 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 CHST4Q8NCG5 386 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 OR51T1Q8NGJ9 327 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 OR4C13Q8NGP0 309 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 OR13C5Q8NGS8 318 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 OR10K1Q8NGX5 313 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 GPR148Q8TDV2 347 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 TNFAIP8L1Q8WVP5 186 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 GGHQ92820 318 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 TMEM106AQ96A25 262 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 NR1H4Q96RI1 486 aaPredicted RBP11.79□□□□□ -0.52
FANCA-220ENST00000566409 MMP27Q9H306 513 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 RANBP3Q9H6Z4 567 aaPredicted RBP11.79□□□□□ -0.52
FANCA-220ENST00000566409 RAB18Q9NP72 206 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 ING3Q9NXR8 418 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 TAS2R3Q9NYW6 316 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 ZNF581Q9P0T4 197 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 MINOS1-NBL1R4GNA1 71 aa11.79□□□□□ -0.52
FANCA-220ENST00000566409 TRGV10A0A0A0MS01 117 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 FAM90A22PA8MWA6 464 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 H0YJX3 145 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 IGLV1-47P01700 117 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 OR3A4PP47883 348 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 RPS11P62280 158 aaKnown RBP eCLIP11.78□□□□□ -0.52
FANCA-220ENST00000566409 FBLN7Q53RD9 439 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 KRBOX4Q5JUW0 171 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 DMKNQ6E0U4 476 aaPredicted RBP11.78□□□□□ -0.52
FANCA-220ENST00000566409 TMPRSS11AQ6ZMR5 421 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 Q6ZS46 218 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 ABHD12Q8N2K0 398 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 DHRSXQ8N5I4 330 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 CFHR4Q92496 578 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 GHSRQ92847 366 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 SMIM19Q96E16 107 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 TMEM80Q96HE8 168 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 CDCA4Q9BXL8 241 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 NPFFR1Q9GZQ6 430 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 SERTAD4Q9NUC0 356 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 ZNF281Q9Y2X9 895 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 EXOSC1Q9Y3B2 195 aaKnown RBP11.78□□□□□ -0.52
FANCA-220ENST00000566409 PCDHGB5Q9Y5G0 923 aa11.78□□□□□ -0.52
FANCA-220ENST00000566409 FUOMA2VDF0 154 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 ANKRD65E5RJM6 399 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 HSPB6O14558 160 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 CDRT1O95170 752 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 ALDOBP05062 364 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 IGFBP3P17936 291 aaPredicted RBP11.77□□□□□ -0.53
FANCA-220ENST00000566409 BLCAPP62952 87 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 DEFA6Q01524 100 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 BDH1Q02338 343 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 SLC34A1Q06495 639 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 ST3GAL4Q11206 333 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 HERPUD1Q15011 391 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 PIGYQ3MUY2 71 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 OGFRL1Q5TC84 451 aaPredicted RBP11.77□□□□□ -0.53
FANCA-220ENST00000566409 Q8N2B8 174 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 KLHDC1Q8N7A1 406 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 C11orf44Q8N8P7 122 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 ZFP41Q8N8Y5 198 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 OR2T6Q8NHC8 308 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms