RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 NXF2Q9GZY0 626 aaKnown RBP12.71□□□□□ -0.37
KNOP1-203ENST00000565844 IFT22Q9H7X7 185 aa12.71□□□□□ -0.37
KNOP1-203ENST00000565844 SEBOXQ9HB31 216 aaPredicted RBP12.71□□□□□ -0.37
KNOP1-203ENST00000565844 CTSZQ9UBR2 303 aa12.71□□□□□ -0.37
KNOP1-203ENST00000565844 MIOXQ9UGB7 285 aa12.71□□□□□ -0.37
KNOP1-203ENST00000565844 IGHV4-61A0A0C4DH41 118 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 SLC33A1O00400 549 aaPredicted RBP12.7□□□□□ -0.38
KNOP1-203ENST00000565844 CTDSP2O14595 271 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 SOCS1O15524 211 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 PDCD6O75340 191 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 SELLP14151 372 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 ELK1P19419 428 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 LMO1P25800 156 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 BLVRBP30043 206 aaPredicted RBP12.7□□□□□ -0.38
KNOP1-203ENST00000565844 KRTAP21-3Q3LHN1 58 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 MOGAT2Q3SYC2 334 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 PAN3Q58A45 887 aaKnown RBP12.7□□□□□ -0.38
KNOP1-203ENST00000565844 SIGIRRQ6IA17 410 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 RAB12Q6IQ22 244 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 LAX1Q8IWV1 398 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 CMTM4Q8IZR5 234 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 TMEM185AQ8NFB2 350 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 OR8B3Q8NGG8 313 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 RAB40AQ8WXH6 277 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 NEIL1Q96FI4 390 aaPredicted RBP12.7□□□□□ -0.38
KNOP1-203ENST00000565844 S100A16Q96FQ6 103 aaKnown RBP12.7□□□□□ -0.38
KNOP1-203ENST00000565844 CMTM3Q96MX0 182 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 NEDD4LQ96PU5 975 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 OR8B2Q96RD0 313 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 ABCG5Q9H222 651 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 MMP27Q9H306 513 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 SPACA1Q9HBV2 294 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 KAAG1Q9UBP8 84 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 MAB21L2Q9Y586 359 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 A3GALT2U3KPV4 340 aa12.7□□□□□ -0.38
KNOP1-203ENST00000565844 TRAV24A0A0B4J272 114 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 TMEM82A0PJX8 343 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 FAM25AB3EWG3 89 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 FAM25CB3EWG5 89 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 FAM25GB3EWG6 89 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 INAFM1C9JVW0 142 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 H3BUI4 141 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 NDUFB3O43676 98 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 PSPNO60542 156 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 SCGNO76038 276 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 IGHV2-5P01817 119 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 APOA1P02647 267 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 FUT3P21217 361 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 USF1P22415 310 aaPredicted RBP12.69□□□□□ -0.38
KNOP1-203ENST00000565844 BRICD5Q6PL45 260 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 SUMF2Q8NBJ7 301 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 OR10R2Q8NGX6 335 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 NEK7Q8TDX7 302 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 RAB3CQ96E17 227 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 DPCDQ9BVM2 203 aaPredicted RBP12.69□□□□□ -0.38
KNOP1-203ENST00000565844 CHST6Q9GZX3 395 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 PPA2Q9H2U2 334 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 PATZ1Q9HBE1 687 aaKnown RBP12.69□□□□□ -0.38
KNOP1-203ENST00000565844 RCC2Q9P258 522 aaKnown RBP12.69□□□□□ -0.38
KNOP1-203ENST00000565844 ADAM30Q9UKF2 790 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 PEX16Q9Y5Y5 336 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 HIVEP2P31629 2446 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 ABCA1O95477 2261 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 FOXI3A8MTJ6 420 aaPredicted RBP12.69□□□□□ -0.38
KNOP1-203ENST00000565844 RNF223E7ERA6 249 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 F5H0A9 414 aaPredicted RBP12.69□□□□□ -0.38
KNOP1-203ENST00000565844 K7N7A8 449 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 RAB27BO00194 218 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 DVL1O14640 695 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 ZNF737O75373 536 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 TK1P04183 234 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 WNT2P09544 360 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 CDK2P24941 298 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 CHATP28329 748 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 OR3A1P47881 315 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 SEC61A1P61619 476 aaKnown RBP12.69□□□□□ -0.38
KNOP1-203ENST00000565844 LRRC10Q5BKY1 277 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 C17orf107Q6ZR85 190 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 C6orf201Q7Z4U5 140 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 RTN4RL2Q86UN3 420 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 OR8H2Q8N162 312 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 BPIFB2Q8N4F0 458 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 DTX3Q8N9I9 347 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 OR4S1Q8NGB4 309 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 RAB39BQ96DA2 213 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 SNX22Q96L94 193 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 FAM234AQ9H0X4 552 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 MIXL1Q9H2W2 232 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 DIABLOQ9NR28 239 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 PLEKHJ1Q9NW61 149 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 PTTG2Q9NZH5 202 aa12.69□□□□□ -0.38
KNOP1-203ENST00000565844 SLC25A10Q9UBX3 287 aaPredicted RBP12.69□□□□□ -0.38
KNOP1-203ENST00000565844 JMJD1CQ15652 2540 aa12.68□□□□□ -0.38
KNOP1-203ENST00000565844 SONP18583 2426 aaKnown RBP12.68□□□□□ -0.38
KNOP1-203ENST00000565844 YLPM1P49750 1951 aaKnown RBP12.68□□□□□ -0.38
KNOP1-203ENST00000565844 A0A0A6YYH2 397 aa12.68□□□□□ -0.38
KNOP1-203ENST00000565844 UBE2QL1A1L167 161 aa12.68□□□□□ -0.38
KNOP1-203ENST00000565844 A6NJ64 397 aa12.68□□□□□ -0.38
KNOP1-203ENST00000565844 MCRIP1C9JLW8 97 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms