RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 TMEM104Q8NE00 496 aa21.51■■□□□ 1.03
NME3-208ENST00000565379 Q96M66 194 aa21.51■■□□□ 1.03
NME3-208ENST00000565379 NDUFA13Q9P0J0 144 aa21.51■■□□□ 1.03
NME3-208ENST00000565379 RAB22AQ9UL26 194 aa21.51■■□□□ 1.03
NME3-208ENST00000565379 PPIAL4CA0A0B4J2A2 164 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 A0A1W2PP11 408 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 SMIM30A4D0T7 59 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 MSMBP08118 114 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 RAB6AP20340 208 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 DUSP1P28562 367 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 CEBPDP49716 269 aaPredicted RBP21.5■■□□□ 1.03
NME3-208ENST00000565379 CLDN12P56749 244 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 RPS27AP62979 156 aaKnown RBP21.5■■□□□ 1.03
NME3-208ENST00000565379 ASCC1Q8N9N2 400 aaKnown RBP21.5■■□□□ 1.03
NME3-208ENST00000565379 TMEM185AQ8NFB2 350 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 TM2D1Q9BX74 207 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 DCSTAMPQ9H295 470 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 BANF2Q9H503 90 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 ABRACLQ9P1F3 81 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 OR5V1Q9UGF6 321 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 CEPT1Q9Y6K0 416 aa21.5■■□□□ 1.03
NME3-208ENST00000565379 SMIM31A0A1B0GVY4 71 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 ZNF701M0R085 212 aaPredicted RBP21.49■■□□□ 1.03
NME3-208ENST00000565379 GEMIN2O14893 280 aaKnown RBP21.49■■□□□ 1.03
NME3-208ENST00000565379 LDLRAD4O15165 306 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 ZNF737O75373 536 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 OR7C1O76099 320 aaPredicted RBP21.49■■□□□ 1.03
NME3-208ENST00000565379 TK1P04183 234 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 KCNJ3P48549 501 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 RORCP51449 518 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 UNC119Q13432 240 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 KRTAP24-1Q3LI83 254 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 IDNKQ5T6J7 187 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 OR8H2Q8N162 312 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 FAM46BQ96A09 425 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 ISOC1Q96CN7 298 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 KCTD12Q96CX2 325 aaKnown RBP21.49■■□□□ 1.03
NME3-208ENST00000565379 DMRTB1Q96MA1 342 aa21.49■■□□□ 1.03
NME3-208ENST00000565379 TRAV20A0A0B4J274 112 aa21.48■■□□□ 1.03
NME3-208ENST00000565379 SLC2A2P11168 524 aaPredicted RBP21.48■■□□□ 1.03
NME3-208ENST00000565379 GABRR1P24046 479 aa21.48■■□□□ 1.03
NME3-208ENST00000565379 SEC61A1P61619 476 aaKnown RBP21.48■■□□□ 1.03
NME3-208ENST00000565379 SCN1BQ07699 218 aa21.48■■□□□ 1.03
NME3-208ENST00000565379 DYNC1I2Q13409 638 aaKnown RBP21.48■■□□□ 1.03
NME3-208ENST00000565379 TAF9Q16594 264 aa21.48■■□□□ 1.03
NME3-208ENST00000565379 ST8SIA4Q92187 359 aa21.48■■□□□ 1.03
NME3-208ENST00000565379 METRNQ9UJH8 293 aa21.48■■□□□ 1.03
NME3-208ENST00000565379 ETV7Q9Y603 341 aa21.48■■□□□ 1.03
NME3-208ENST00000565379 LOC105371242A0A075B767 164 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 TMEM272A0A1B0GTI8 110 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 A0A1B0GW55 424 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 FUOMA2VDF0 154 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 SIRPB1O00241 398 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 SLC33A1O00400 549 aaPredicted RBP21.47■■□□□ 1.03
NME3-208ENST00000565379 TFF1P04155 84 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 CSN2P05814 226 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 GLAP06280 429 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 DUX4L2P0CJ85 424 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 DUX4L3P0CJ86 424 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 DUX4L4P0CJ87 422 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 DUX4L5P0CJ88 424 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 DUX4L6P0CJ89 424 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 DUX4L7P0CJ90 424 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 GATA3P23771 443 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 OR10K2Q6IF99 312 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 DUX4L9Q6RFH8 374 aaPredicted RBP21.47■■□□□ 1.03
NME3-208ENST00000565379 DUX4Q9UBX2 424 aa21.47■■□□□ 1.03
NME3-208ENST00000565379 TRBV23-1A0A0A0MS06 115 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 TMEM82A0PJX8 343 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 CCDC160A6NGH7 325 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 MGST3O14880 152 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 LIPFP07098 398 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 NDUFB7P17568 137 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 ZFP36P26651 326 aaKnown RBP21.46■■□□□ 1.03
NME3-208ENST00000565379 DVL1P1P54792 670 aaPredicted RBP21.46■■□□□ 1.03
NME3-208ENST00000565379 C17orf107Q6ZR85 190 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 GLCCI1Q86VQ1 547 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 NDNFQ8TB73 568 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 AP3S1Q92572 193 aa21.46■■□□□ 1.03
NME3-208ENST00000565379 RSL24D1Q9UHA3 163 aaKnown RBP21.46■■□□□ 1.03
NME3-208ENST00000565379 METTL21EPA6NDL7 271 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 H3BMQ9 156 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 PSPNO60542 156 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 SELLP14151 372 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 HNF1AP20823 631 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 FUT3P21217 361 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 LCN2P80188 198 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 RBM39Q14498 530 aaKnown RBP21.45■■□□□ 1.02
NME3-208ENST00000565379 GRK1Q15835 563 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 PAN3Q58A45 887 aaKnown RBP21.45■■□□□ 1.02
NME3-208ENST00000565379 BTN2A1Q7KYR7 527 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 GDPD3Q7L5L3 318 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 FAM89BQ8N5H3 189 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 ACOT12Q8WYK0 555 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 TMEM186Q96B77 213 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 DCTN5Q9BTE1 182 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 RBM38Q9H0Z9 239 aaKnown RBP21.45■■□□□ 1.02
NME3-208ENST00000565379 LPAR5Q9H1C0 372 aa21.45■■□□□ 1.02
NME3-208ENST00000565379 RCC2Q9P258 522 aaKnown RBP21.45■■□□□ 1.02
NME3-208ENST00000565379 SPATA2Q9UM82 520 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms