RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 IL17DQ8TAD2 202 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 DCUN1D4Q92564 292 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 LEAP2Q969E1 77 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 ST6GALNAC6Q969X2 333 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 BORCS8Q96FH0 119 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 SPATA25Q9BR10 227 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 DGCR6LQ9BY27 220 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 YIPF3Q9GZM5 350 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 ABCG5Q9H222 651 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 GHITMQ9H3K2 345 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 PLEKHA1Q9HB21 404 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 SEBOXQ9HB31 216 aaPredicted RBP5.7□□□□□ -1.5
VPS4A-203ENST00000564399 EXOSC4Q9NPD3 245 aaKnown RBP5.7□□□□□ -1.5
VPS4A-203ENST00000564399 LIN7CQ9NUP9 197 aaKnown RBP5.7□□□□□ -1.5
VPS4A-203ENST00000564399 V9GYS6 101 aa5.7□□□□□ -1.5
VPS4A-203ENST00000564399 A0A087X0M5 115 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 IGHV3-72A0A0B4J1Y9 119 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 TRBV2A0A0J9YWF9 115 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 A0A1B0GTI1 187 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 A0A1B0GX30 115 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 ZNF729A6NN14 1252 aaPredicted RBP5.69□□□□□ -1.5
VPS4A-203ENST00000564399 PRR32B1ATL7 298 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 J3QR06 171 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 ARPC2O15144 300 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 SLC25A17O43808 307 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 MPZL2O60487 215 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 ENTPD6O75354 484 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 GATBO75879 557 aaKnown RBP5.69□□□□□ -1.5
VPS4A-203ENST00000564399 SERPINA3P01011 423 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 IGHG4P01861 327 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 IGHV4-30-4P0DP06 118 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 ZNF44P15621 663 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 BCL3P20749 454 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 NPBWR2P48146 333 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 GINS1Q14691 196 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 ZNF146Q15072 292 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 UBE2V2Q15819 145 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 LTC4SQ16873 150 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 MICAQ29983 383 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 ODF4Q2M2E3 257 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 KRBOX4Q5JUW0 171 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 SPIN3Q5JUX0 258 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 SLC35D3Q5M8T2 416 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 CGB2Q6NT52 195 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 SGPP2Q8IWX5 399 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 ELMOD2Q8IZ81 293 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 BBS1Q8NFJ9 593 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 OR10X1Q8NGY0 326 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 HAVCR2Q8TDQ0 301 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 ASB17Q8WXJ9 295 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 RBMXL1Q96E39 390 aaKnown RBP5.69□□□□□ -1.5
VPS4A-203ENST00000564399 KIRREL1Q96J84 757 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 EAF1Q96JC9 268 aaPredicted RBP5.69□□□□□ -1.5
VPS4A-203ENST00000564399 RASL11BQ9BPW5 248 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 MOB1AQ9H8S9 216 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 GNB4Q9HAV0 340 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 OR52A1Q9UKL2 312 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 PSG11Q9UQ72 335 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 VSIG4Q9Y279 399 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 GSTK1Q9Y2Q3 226 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 SAMHD1Q9Y3Z3 626 aaKnown RBP5.69□□□□□ -1.5
VPS4A-203ENST00000564399 TMEM14AQ9Y6G1 99 aa5.69□□□□□ -1.5
VPS4A-203ENST00000564399 KBTBD11-OT1A0A1B0GTJ5 212 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 DHRS7CA6NNS2 312 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 I3L521 148 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 MAGEB4O15481 346 aaPredicted RBP5.68□□□□□ -1.5
VPS4A-203ENST00000564399 CCDC22O60826 627 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 OR2H2O95918 312 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 HMGN1P05114 100 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 OR5H8P0DN80 308 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 PSMB8P28062 276 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 SOX6P35712 828 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 GLP1RP43220 463 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 REG1BP48304 166 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 GNG10P50151 68 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 ATP1B3P54709 279 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 ZP1P60852 638 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 ACTR3P61158 418 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 ISL1P61371 349 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 GNB1P62873 340 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 ROM1Q03395 351 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 APOFQ13790 326 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 ATXN7L3Q14CW9 347 aaPredicted RBP5.68□□□□□ -1.5
VPS4A-203ENST00000564399 C17orf58Q2M2W7 97 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 ASPHD1Q5U4P2 390 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 FAM53AQ6NSI3 398 aaPredicted RBP5.68□□□□□ -1.5
VPS4A-203ENST00000564399 PLEKHG7Q6ZR37 379 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 Q8N9W7 124 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 OR10G2Q8NGC3 310 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 OR2T10Q8NGZ9 312 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 DDB2Q92466 427 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 DLX4Q92988 240 aaPredicted RBP5.68□□□□□ -1.5
VPS4A-203ENST00000564399 EME1Q96AY2 570 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 CMTM5Q96DZ9 223 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 UBE2E2Q96LR5 201 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 KCTD7Q96MP8 289 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 OR4C12Q96R67 309 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 APOL4Q9BPW4 351 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 NIPSNAP1Q9BPW8 284 aa5.68□□□□□ -1.5
VPS4A-203ENST00000564399 ADI1Q9BV57 179 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms