RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 FLNAP21333 2647 aaKnown RBP15.61■□□□□ 0.09
RAB40C-207ENST00000563109 DOCK11Q5JSL3 2073 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 TRBV23-1A0A0A0MS06 115 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 SMIM31A0A1B0GVY4 71 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 FUOMA2VDF0 154 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 H3BMQ9 156 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 MGST3O14880 152 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 LDLRAD4O15165 306 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 ENSAO43768 121 aaKnown RBP15.6■□□□□ 0.09
RAB40C-207ENST00000563109 CD5LO43866 347 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 PSPNO60542 156 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 SOX6P35712 828 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 OR3A1P47881 315 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 DVL1P1P54792 670 aaPredicted RBP15.6■□□□□ 0.09
RAB40C-207ENST00000563109 EDDM3BP56851 147 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 EDDM3AQ14507 147 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 SPCS2Q15005 226 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 BTNL3Q6UXE8 466 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 C17orf107Q6ZR85 190 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 BIVMQ86UB2 503 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 FGFRL1Q8N441 504 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 OR4S1Q8NGB4 309 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 NEK7Q8TDX7 302 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 AP3S1Q92572 193 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 PTX4Q96A99 478 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 TMEM186Q96B77 213 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 KCTD12Q96CX2 325 aaKnown RBP15.6■□□□□ 0.09
RAB40C-207ENST00000563109 NEDD4LQ96PU5 975 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 DPCDQ9BVM2 203 aaPredicted RBP15.6■□□□□ 0.09
RAB40C-207ENST00000563109 LPAR5Q9H1C0 372 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 NDUFA13Q9P0J0 144 aa15.6■□□□□ 0.09
RAB40C-207ENST00000563109 RSL24D1Q9UHA3 163 aaKnown RBP15.6■□□□□ 0.09
RAB40C-207ENST00000563109 ABCA2Q9BZC7 2435 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 TRAV24A0A0B4J272 114 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 PPIAL4CA0A0B4J2A2 164 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 IGHV2-70DA0A0C4DH43 119 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 A0A0G2JMP0 313 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 A0A0X1KG70 313 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 METTL21EPA6NDL7 271 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 PDCD6O75340 191 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 FCN3O75636 299 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 KCNJ3P48549 501 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 RBM39Q14498 530 aaKnown RBP15.59■□□□□ 0.09
RAB40C-207ENST00000563109 ATXN7L3Q14CW9 347 aaPredicted RBP15.59■□□□□ 0.09
RAB40C-207ENST00000563109 NKAPLQ5M9Q1 402 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 DCAF12L2Q5VW00 463 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 RAB12Q6IQ22 244 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 SUMF2Q8NBJ7 301 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 OR4M2Q8NGB6 313 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 OR56B1Q8NGI3 324 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 NUDT16L1Q9BRJ7 211 aaKnown RBP15.59■□□□□ 0.09
RAB40C-207ENST00000563109 NICN1Q9BSH3 213 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 DCTN5Q9BTE1 182 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 SHARPINQ9H0F6 387 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 RBM38Q9H0Z9 239 aaKnown RBP15.59■□□□□ 0.09
RAB40C-207ENST00000563109 HIF1ANQ9NWT6 349 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 RCC2Q9P258 522 aaKnown RBP15.59■□□□□ 0.09
RAB40C-207ENST00000563109 LPAR3Q9UBY5 353 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 RPUSD1Q9UJJ7 312 aaKnown RBP15.59■□□□□ 0.09
RAB40C-207ENST00000563109 KCNS2Q9ULS6 477 aa15.59■□□□□ 0.09
RAB40C-207ENST00000563109 A0A1W2PQ09 198 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 C22orf46C9J442 243 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 MCRIP1C9JLW8 97 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 ZNF701M0R085 212 aaPredicted RBP15.58■□□□□ 0.08
RAB40C-207ENST00000563109 PAHP00439 452 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 CSN2P05814 226 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 FUT3P21217 361 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 GATA3P23771 443 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 FAM185AQ8N0U4 392 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 RAB40AQ8WXH6 277 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 BARHL1Q9BZE3 327 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 ZNF581Q9P0T4 197 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 SPATA2Q9UM82 520 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 PEX16Q9Y5Y5 336 aa15.58■□□□□ 0.08
RAB40C-207ENST00000563109 MAP1AP78559 2803 aaPredicted RBP15.58■□□□□ 0.08
RAB40C-207ENST00000563109 A0A1W2PPH5 198 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 SCGNO76038 276 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 GLAP06280 429 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 BLVRBP30043 206 aaPredicted RBP15.57■□□□□ 0.08
RAB40C-207ENST00000563109 VEGFCP49767 419 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 EFNB2P52799 333 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 P2RX3P56373 397 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 RPL31P62899 125 aaKnown RBP15.57■□□□□ 0.08
RAB40C-207ENST00000563109 KRBOX4Q5JUW0 171 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 METAP1DQ6UB28 335 aaPredicted RBP15.57■□□□□ 0.08
RAB40C-207ENST00000563109 CLEC9AQ6UXN8 241 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 BPIFB2Q8N4F0 458 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 OR4M1Q8NGD0 313 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 ACOT12Q8WYK0 555 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 ATG5Q9H1Y0 275 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 RHBDL2Q9NX52 303 aa15.57■□□□□ 0.08
RAB40C-207ENST00000563109 A0A0A6YYD4 124 aa15.56■□□□□ 0.08
RAB40C-207ENST00000563109 LIPFP07098 398 aa15.56■□□□□ 0.08
RAB40C-207ENST00000563109 PPIAL4GP0DN37 164 aa15.56■□□□□ 0.08
RAB40C-207ENST00000563109 ZNF182P17025 639 aaPredicted RBP15.56■□□□□ 0.08
RAB40C-207ENST00000563109 ERP29P30040 261 aaKnown RBP15.56■□□□□ 0.08
RAB40C-207ENST00000563109 KRTAP1-1Q07627 177 aa15.56■□□□□ 0.08
RAB40C-207ENST00000563109 PLA2G7Q13093 441 aa15.56■□□□□ 0.08
RAB40C-207ENST00000563109 DYNC1I2Q13409 638 aaKnown RBP15.56■□□□□ 0.08
RAB40C-207ENST00000563109 MZT2AQ6P582 158 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms