RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 ING4Q9UNL4 249 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 TRAV24A0A0B4J272 114 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 ARL6IP5O75915 188 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 ERP29P30040 261 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 EDDM3BP56851 147 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 EDDM3AQ14507 147 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 SLC22A6Q4U2R8 563 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 C1orf100Q5SVJ3 147 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 GPR157Q5UAW9 335 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 RUSC1-AS1Q66K80 236 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 BRD3OSQ6XYD6 125 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 LINC00596Q86U02 117 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 BCL6BQ8N143 479 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 TPRX1Q8N7U7 411 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 LHX4Q969G2 390 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 S100A13Q99584 98 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 SUCNR1Q9BXA5 334 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 PPA2Q9H2U2 334 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 IFT22Q9H7X7 185 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 ST3GAL6Q9Y274 331 aa12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 SOX21Q9Y651 276 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-219ENST00000560871 TRDV1A0A1B0GX56 115 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 SHISA3A0PJX4 238 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 C17orf98A8MV24 154 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 RNASEK-C17orf49H0YIS7 233 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 GEMIN2O14893 280 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 DEGS1O15121 323 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 SLC22A1O15245 554 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 TNFAIP8O95379 198 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 CSTBP04080 98 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 GALP22466 123 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 PRTN3P24158 256 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 CALRP27797 417 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 P2RX3P56373 397 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 BPIFB3P59826 476 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 PRB3Q04118 309 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 MEF2CQ06413 473 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 KLRD1Q13241 179 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 GPR176Q14439 515 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 MPV17LQ2QL34 196 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 SYT6Q5T7P8 510 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 GLT8D1Q68CQ7 371 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 BPIFB2Q8N4F0 458 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 TMEM104Q8NE00 496 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 FOXRED1Q96CU9 486 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 COQ2Q96H96 371 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 NR1H4Q96RI1 486 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 JMJD8Q96S16 334 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 SLITRK2Q9H156 845 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 METTL8Q9H825 291 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 GHRLQ9UBU3 117 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 LINC00312Q9Y6C7 94 aa12.69□□□□□ -0.38
RABGGTA-219ENST00000560871 STAB1Q9NY15 2570 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 IGHV1-69DA0A0B4J2H0 117 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 A0A1W2PPH5 198 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 IGHV1-69P01742 117 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 GTF2F2P13984 249 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 FPR2P25090 351 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 PAX5Q02548 391 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 SCN1BQ07699 218 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 BLMHQ13867 455 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 ATXN7L3Q14CW9 347 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 NEDD8Q15843 81 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 HCP5Q6MZN7 132 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 OR6M1Q8NGM8 313 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 MRPS24Q96EL2 167 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 MS4A7Q9GZW8 240 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 ZNF696Q9H7X3 374 aa12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 RCC2Q9P258 522 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-219ENST00000560871 FBN3Q75N90 2809 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 MDFIC2A0A1B0GVS7 189 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 hADV38S2A0JD32 116 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 MEX3AA1L020 520 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 TRIM64CA6NLI5 447 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 TRIM77I1YAP6 450 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 OR7C1O76099 320 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 RBP4P02753 201 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 MGMTP16455 207 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 GLIPR1P48060 266 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 ERVFRD-1P60508 538 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 AESQ08117 197 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 PAN3Q58A45 887 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 NCR3LG1Q68D85 454 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 PDZD9Q8IXQ8 264 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 ZDHHC22Q8N966 263 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 FAM216AQ8WUB2 273 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 SLC25A28Q96A46 364 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 Q96M66 194 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 ZNF714Q96N38 554 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 ESM1Q9NQ30 184 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 PCDHB16Q9NRJ7 776 aa12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 AK6Q9Y3D8 172 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-219ENST00000560871 TRAV1-2A0A0B4J238 106 aa12.66□□□□□ -0.38
RABGGTA-219ENST00000560871 ODAMA1E959 279 aa12.66□□□□□ -0.38
RABGGTA-219ENST00000560871 SLC17A2O00624 439 aa12.66□□□□□ -0.38
RABGGTA-219ENST00000560871 HSPB6O14558 160 aa12.66□□□□□ -0.38
RABGGTA-219ENST00000560871 UBBP0CG47 229 aa12.66□□□□□ -0.38
RABGGTA-219ENST00000560871 ZNF728P0DKX0 622 aa12.66□□□□□ -0.38
RABGGTA-219ENST00000560871 VSIG8P0DPA2 414 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms