RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 AMMECR1Q9Y4X0 333 aaPredicted RBP14.02□□□□□ -0.17
TSPAN3-208ENST00000560514 PRKYO43930 277 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 SRSF10O75494 262 aaKnown RBP14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 ATP5HO75947 161 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 MRPL3P09001 348 aaKnown RBP14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 DUSP1P28562 367 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 PTGFRP43088 359 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 SNU13P55769 128 aaKnown RBP14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 ZNF91Q05481 1191 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 BNIP1Q12981 228 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 HNF4GQ14541 408 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 ATP6AP1Q15904 470 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 ZNF322Q6U7Q0 402 aaPredicted RBP14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 ZDHHC13Q8IUH4 622 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 ELMOD2Q8IZ81 293 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 TMEM163Q8TC26 289 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 KRT84Q9NSB2 600 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 COPS3Q9UNS2 423 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 SNX5Q9Y5X3 404 aa14.01□□□□□ -0.17
TSPAN3-208ENST00000560514 ZAR1LA6NP61 321 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 LY6LH3BQJ8 138 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 GATBO75879 557 aaKnown RBP14□□□□□ -0.17
TSPAN3-208ENST00000560514 IGHG2P01859 326 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 RPLP1P05386 114 aaKnown RBP14□□□□□ -0.17
TSPAN3-208ENST00000560514 NFYBP25208 207 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 OR3A1P47881 315 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 INSL3P51460 131 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 FUT6P51993 359 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 CDC42P60953 191 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM27D1Q5T7N8 215 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 C12orf73Q69YU5 71 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 KDM4DQ6B0I6 523 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 OVCH2Q7RTZ1 564 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 GID4Q8IVV7 300 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 DRAM1Q8N682 238 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 BORCS8Q96FH0 119 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 CITED4Q96RK1 184 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 CLN6Q9NWW5 311 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 IL36RNQ9UBH0 155 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 OR52A1Q9UKL2 312 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 R4GMQ9 66 aa14□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A18PA6NE21 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A16PA6NEW6 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A20PA6NIJ5 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A9PA6NNJ1 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A12PA8MX19 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A5PA8MXJ8 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 ZNF670-ZNF695F2Z2N8 137 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 AP4M1O00189 453 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 SIRPB1O00241 398 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 SERPINA3P01011 423 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A15PP0C7V4 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A13PP0C7W8 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A14PP0C7W9 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM90A24PP0C7X0 464 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 PRKACAP17612 351 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FASP25445 335 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 CDX1P47902 265 aaPredicted RBP13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 CXCR4P61073 352 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 GPR50Q13585 617 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 SLC35F2Q8IXU6 374 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 FAM58AQ8N1B3 248 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 TCEANCQ8N8B7 351 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 CCDC54Q8NEL0 328 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 OR9G1Q8NH87 305 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 CORO2AQ92828 525 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 APOL4Q9BPW4 351 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 OSBPL10Q9BXB5 764 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 GABARAPL1Q9H0R8 117 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 ADGRL4Q9HBW9 690 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 NKX1-2Q9UD57 310 aaPredicted RBP13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 WARS2Q9UGM6 360 aaKnown RBP13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 AP4S1Q9Y587 144 aa13.99□□□□□ -0.17
TSPAN3-208ENST00000560514 PRR32B1ATL7 298 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 SH2D1BO14796 132 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 FCGR1AP12314 374 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 GDNFP39905 211 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 TMED1Q13445 227 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 ZNF146Q15072 292 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 SPIN3Q5JUX0 258 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 ISOC1Q96CN7 298 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 LYSTQ99698 3801 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 EXOSC4Q9NPD3 245 aaKnown RBP13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 RBFOX1Q9NWB1 397 aaKnown RBP13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 DNAH1Q9P2D7 4330 aa13.98□□□□□ -0.17
TSPAN3-208ENST00000560514 IGKV1-27A0A075B6S5 117 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 A0A087X0M5 115 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 TRBV2A0A0J9YWF9 115 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 A0A1B0GTI1 187 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 A0A1B0GX30 115 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 RRP9O43818 475 aaKnown RBP13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 SULT1C4O75897 302 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 IGKV1D-33P01593 117 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 IGKV1-33P01594 117 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 ELANEP08246 267 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 OR2T7P0C7T2 308 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 CALCBP10092 127 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 BCL3P20749 454 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 CCL1P22362 96 aa13.97□□□□□ -0.17
TSPAN3-208ENST00000560514 GLIPR1P48060 266 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms