RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TEX36Q5VZQ5 186 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 CCBE1Q6UXH8 406 aaPredicted RBP7.24□□□□□ -1.25
TRAF3-209ENST00000560463 Q6ZNX1 250 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 Q6ZS49 121 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 GDPD3Q7L5L3 318 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 BEST4Q8NFU0 473 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 PPP1R35Q8TAP8 253 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 NEK7Q8TDX7 302 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 TRAF4Q9BUZ4 470 aaPredicted RBP7.24□□□□□ -1.25
TRAF3-209ENST00000560463 DPCDQ9BVM2 203 aaPredicted RBP7.24□□□□□ -1.25
TRAF3-209ENST00000560463 DNTTIP1Q9H147 329 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 WDR13Q9H1Z4 485 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 HRASLSQ9HDD0 168 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 DNAJB11Q9UBS4 358 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 OR14J1Q9UGF5 321 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 MGAT4AQ9UM21 535 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 WIPI2Q9Y4P8 454 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 COL12A1Q99715 3063 aa7.24□□□□□ -1.25
TRAF3-209ENST00000560463 TRAV38-1A0A0B4J264 116 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 RFPL4AA6NLU0 287 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 DISC1C4P0D8 188 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 RFPL4AL1F8VTS6 287 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 TMEM178BH3BS89 294 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.23□□□□□ -1.25
TRAF3-209ENST00000560463 WNT9BO14905 357 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 FSTL3O95633 263 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 RAB3DO95716 219 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 CD8AP01732 235 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 MT-ND4P03905 459 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 CSN2P05814 226 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 FCGR3AP08637 254 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 PSG2P11465 335 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 EGR1P18146 543 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 AMY2BP19961 511 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 PRDX2P32119 198 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 BTCP35070 178 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 PAX5Q02548 391 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 HFEQ30201 348 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 RNASE10Q5GAN6 216 aaKnown RBP7.23□□□□□ -1.25
TRAF3-209ENST00000560463 PLET1Q6UQ28 207 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 ZNF782Q6ZMW2 699 aaPredicted RBP7.23□□□□□ -1.25
TRAF3-209ENST00000560463 RTN4RL2Q86UN3 420 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 GAPTQ8N292 157 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 ZCCHC24Q8N2G6 241 aaKnown RBP7.23□□□□□ -1.25
TRAF3-209ENST00000560463 GVQW1Q8N7I0 195 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 OR5AP2Q8NGF4 316 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 OR4C16Q8NGL9 310 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 OR4K15Q8NH41 348 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 ANGPTL6Q8NI99 470 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 NEU4Q8WWR8 484 aaPredicted RBP7.23□□□□□ -1.25
TRAF3-209ENST00000560463 RDH5Q92781 318 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 SNX22Q96L94 193 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 PRRT1Q99946 306 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 VRK1Q99986 396 aaPredicted RBP7.23□□□□□ -1.25
TRAF3-209ENST00000560463 CACNG6Q9BXT2 260 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 ZNF286AQ9HBT8 521 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 TMEM165Q9HC07 324 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 DLL4Q9NR61 685 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 ZNF701Q9NV72 531 aaPredicted RBP7.23□□□□□ -1.25
TRAF3-209ENST00000560463 ETAA1Q9NY74 926 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 ZNF581Q9P0T4 197 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 SCP2D1Q9UJQ7 156 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 USP9YO00507 2555 aaPredicted RBP7.23□□□□□ -1.25
TRAF3-209ENST00000560463 TENM4Q6N022 2769 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 USF3Q68DE3 2245 aa7.23□□□□□ -1.25
TRAF3-209ENST00000560463 IGKV1D-17A0A075B6S4 117 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 PPIAL4EA0A075B759 164 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 IGHV1-69-2A0A0G2JMI3 117 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 KIR2DS1A0A191URI9 304 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 OOEPA6NGQ2 149 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 PPIAL4DF5H284 164 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 J3QKU1 62 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 SIRPB1O00241 398 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 NDUFA2O43678 99 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 CYB5R3P00387 301 aaPredicted RBP7.22□□□□□ -1.25
TRAF3-209ENST00000560463 HPXP02790 462 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 TCRBP04435 133 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 AMY2AP04746 511 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 IFNA6P05013 189 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 RNF224P0DH78 156 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 PPIAL4FP0DN26 164 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 PLA2G2AP14555 144 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 HLA-DMAP28067 261 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 KIR2DS4P43632 304 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 OR3A3P47888 321 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 RAG2P55895 527 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 ARPC4P59998 168 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 GMFBP60983 142 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 MRPS11P82912 194 aaKnown RBP7.22□□□□□ -1.25
TRAF3-209ENST00000560463 COL10A1Q03692 680 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 KIR2DS1Q14954 304 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 RBMS2Q15434 407 aaKnown RBP7.22□□□□□ -1.25
TRAF3-209ENST00000560463 GRK1Q15835 563 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 KCNJ8Q15842 424 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 CHRFAM7AQ494W8 412 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 PLA1AQ53H76 456 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 VAX1Q5SQQ9 334 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 ATPAF1Q5TC12 328 aaPredicted RBP7.22□□□□□ -1.25
TRAF3-209ENST00000560463 STUMQ69YW2 141 aa7.22□□□□□ -1.25
TRAF3-209ENST00000560463 SLC35E4Q6ICL7 350 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms