RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 LEAP2Q969E1 77 aa12.96□□□□□ -0.33
HERC1-207ENST00000560316 RNFT2Q96EX2 444 aa12.96□□□□□ -0.33
HERC1-207ENST00000560316 BORCS8Q96FH0 119 aa12.96□□□□□ -0.33
HERC1-207ENST00000560316 HRASLS5Q96KN8 279 aa12.96□□□□□ -0.33
HERC1-207ENST00000560316 EXOSC4Q9NPD3 245 aaKnown RBP12.96□□□□□ -0.33
HERC1-207ENST00000560316 GSTK1Q9Y2Q3 226 aa12.96□□□□□ -0.33
HERC1-207ENST00000560316 AMMECR1Q9Y4X0 333 aaPredicted RBP12.96□□□□□ -0.33
HERC1-207ENST00000560316 SNX5Q9Y5X3 404 aa12.96□□□□□ -0.33
HERC1-207ENST00000560316 TMEM14AQ9Y6G1 99 aa12.96□□□□□ -0.33
HERC1-207ENST00000560316 TCRBV5S2A0A599 114 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 FUOMA2VDF0 154 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 CCL1P22362 96 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 INSL3P51460 131 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 CXCR4P61073 352 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 CDK5Q00535 292 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 SPIN3Q5JUX0 258 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 FAM27D1Q5T7N8 215 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 TMEM236Q5W0B7 351 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 RNF152Q8N8N0 203 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 ISOC1Q96CN7 298 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 COQ2Q96H96 371 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 KIRREL1Q96J84 757 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 KRTAP3-3Q9BYR6 98 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 KRTAP3-2Q9BYR7 98 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 EDA2RQ9HAV5 297 aa12.95□□□□□ -0.34
HERC1-207ENST00000560316 ZNF729A6NN14 1252 aaPredicted RBP12.94□□□□□ -0.34
HERC1-207ENST00000560316 NCBP2LA6PVI3 153 aaKnown RBP12.94□□□□□ -0.34
HERC1-207ENST00000560316 J3QR06 171 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 SH2D1BO14796 132 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 GATBO75879 557 aaKnown RBP12.94□□□□□ -0.34
HERC1-207ENST00000560316 SASH3O75995 380 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 ELANEP08246 267 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 SCN1BQ07699 218 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 KRBOX4Q5JUW0 171 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 GON7Q9BXV9 100 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 CHST5Q9GZS9 411 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 ABCG5Q9H222 651 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 PPIL3Q9H2H8 161 aaKnown RBP12.94□□□□□ -0.34
HERC1-207ENST00000560316 HMG20AQ9NP66 347 aa12.94□□□□□ -0.34
HERC1-207ENST00000560316 TRIM64CA6NLI5 447 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 SYT7O43581 403 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 RPP14O95059 124 aaKnown RBP12.93□□□□□ -0.34
HERC1-207ENST00000560316 CYB5AP00167 134 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 SPNP16150 400 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 MADCAM1Q13477 382 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 ATXN7L3Q14CW9 347 aaPredicted RBP12.93□□□□□ -0.34
HERC1-207ENST00000560316 ASPHD1Q5U4P2 390 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 TMEM179BQ7Z7N9 219 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 CNN2Q99439 309 aaKnown RBP12.93□□□□□ -0.34
HERC1-207ENST00000560316 TM2D3Q9BRN9 247 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 CCDC134Q9H6E4 229 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 MAGIXQ9H6Y5 334 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 ISYNA1Q9NPH2 558 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 ACTR3BQ9P1U1 418 aa12.93□□□□□ -0.34
HERC1-207ENST00000560316 MRM2Q9UI43 246 aaKnown RBP12.93□□□□□ -0.34
HERC1-207ENST00000560316 IGHV3-72A0A0B4J1Y9 119 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 KBTBD11-OT1A0A1B0GTJ5 212 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 OSMP13725 252 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 ZNF44P15621 663 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 RBP2P50120 134 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 GNG10P50151 68 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 RAB7AP51149 207 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 ATP1B3P54709 279 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 CFHR3Q02985 330 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 LTC4SQ16873 150 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 FAM53AQ6NSI3 398 aaPredicted RBP12.92□□□□□ -0.34
HERC1-207ENST00000560316 ZNF429Q86V71 674 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 TGIF2LXQ8IUE1 241 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 DEFB107AQ8IZN7 70 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 OR8H3Q8N146 312 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 Q8N9W7 124 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 EAF1Q96JC9 268 aaPredicted RBP12.92□□□□□ -0.34
HERC1-207ENST00000560316 LIN7CQ9NUP9 197 aaKnown RBP12.92□□□□□ -0.34
HERC1-207ENST00000560316 TVP23BQ9NYZ1 205 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 PSG11Q9UQ72 335 aa12.92□□□□□ -0.34
HERC1-207ENST00000560316 IGKV1-12A0A0C4DH73 117 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 SERPINA3P01011 423 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 IGKV1D-12P01611 117 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 IGHG4P01861 327 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 OR8U8P0C7N1 319 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 CGB3P0DN86 165 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 CGB7P0DN87 165 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 GP9P14770 177 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 GLP1RP43220 463 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 MTCP1P56278 107 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 ACTR3P61158 418 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 BNIP1Q12981 228 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 EBI3Q14213 229 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 BCDIN3DQ7Z5W3 292 aaKnown RBP12.91□□□□□ -0.34
HERC1-207ENST00000560316 MOB3BQ86TA1 216 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 SLC35F2Q8IXU6 374 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 OR1N2Q8NGR9 330 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 RFT1Q96AA3 541 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 HSPB9Q9BQS6 159 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 GNB4Q9HAV0 340 aa12.91□□□□□ -0.34
HERC1-207ENST00000560316 IGKV1-9A0A0C4DH69 117 aa12.9□□□□□ -0.34
HERC1-207ENST00000560316 A0A1W2PPE3 182 aa12.9□□□□□ -0.34
HERC1-207ENST00000560316 SLC33A1O00400 549 aaPredicted RBP12.9□□□□□ -0.34
HERC1-207ENST00000560316 RRP9O43818 475 aaKnown RBP12.9□□□□□ -0.34
HERC1-207ENST00000560316 SAP30O75446 220 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms