RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 BCL2L14Q9BZR8 327 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 SLC25A31Q9H0C2 315 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 OR51E2Q9H255 320 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 MS4A6AQ9H2W1 248 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 MAP1LC3AQ9H492 121 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 NOX3Q9HBY0 568 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 PARP11Q9NR21 331 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 DDX19AQ9NUU7 478 aaKnown RBP2.39□□□□□ -2.03
SPG11-218ENST00000559754 DMAC2Q9NW81 257 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 PSG11Q9UQ72 335 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.39□□□□□ -2.03
SPG11-218ENST00000559754 INSIG2Q9Y5U4 225 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 WSB1Q9Y6I7 421 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 ADAMTS13Q76LX8 1427 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 GTF3C1Q12789 2109 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 LTBP1Q14766 1721 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 EVC2Q86UK5 1308 aa2.39□□□□□ -2.03
SPG11-218ENST00000559754 A0A1W2PP64 1363 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 IGHV5-10-1A0A0J9YXX1 117 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 A0A0U1RQV1 116 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 LOC389332A0A1B0GUA5 103 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 MYBPHLA2RUH7 354 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 METTL15A6NJ78 407 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 KCNK1O00180 336 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 FFAR1O14842 300 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 DHRS3O75911 302 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 YIF1AO95070 293 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 CA2P00918 260 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 IGLV2-8P01709 118 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 IFNA16P05015 189 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 IGHV1-8P0DP01 117 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 M6PRP20645 277 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 PRTN3P24158 256 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 PSMA1P25786 263 aaKnown RBP2.38□□□□□ -2.03
SPG11-218ENST00000559754 OMPP47874 163 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 ACOT2P49753 483 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 GDI2P50395 445 aaKnown RBP2.38□□□□□ -2.03
SPG11-218ENST00000559754 IDH3GP51553 393 aaPredicted RBP2.38□□□□□ -2.03
SPG11-218ENST00000559754 PPP1CAP62136 330 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 LSM6P62312 80 aaKnown RBP2.38□□□□□ -2.03
SPG11-218ENST00000559754 GRB2P62993 217 aaKnown RBP2.38□□□□□ -2.03
SPG11-218ENST00000559754 GTF2BQ00403 316 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 GLO1Q04760 184 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 PDK2Q15119 407 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 TMED2Q15363 201 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 MPV17L2Q567V2 206 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 CLVS2Q5SYC1 327 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 GUSBP11Q6P575 273 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 TNFAIP8L2Q6P589 184 aaPredicted RBP2.38□□□□□ -2.03
SPG11-218ENST00000559754 MTERF4Q7Z6M4 381 aaKnown RBP2.38□□□□□ -2.03
SPG11-218ENST00000559754 STX12Q86Y82 276 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 TRAPPC5Q8IUR0 188 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 PCP2Q8IVA1 136 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 STK40Q8N2I9 435 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 OR2M7Q8NG81 312 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 OR4M1Q8NGD0 313 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 OR4C13Q8NGP0 309 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 OR52P1PQ8NH57 321 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 OR1L1Q8NH94 360 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 BLOC1S5Q8TDH9 187 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 PPCDCQ96CD2 204 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 NEURL3Q96EH8 262 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 PRAP1Q96NZ9 151 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 OR2A5Q96R48 311 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 HDHD3Q9BSH5 251 aaPredicted RBP2.38□□□□□ -2.03
SPG11-218ENST00000559754 NUDT9Q9BW91 350 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 GGTLC1Q9BX51 225 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 PLEKHF2Q9H8W4 249 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 NANOGQ9H9S0 305 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 SLC2A9Q9NRM0 540 aa2.38□□□□□ -2.03
SPG11-218ENST00000559754 KLF13Q9Y2Y9 288 aaPredicted RBP2.38□□□□□ -2.03
SPG11-218ENST00000559754 KMT2EQ8IZD2 1858 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 IGHV3-64DA0A0J9YX35 117 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 CD300LBA8K4G0 201 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 SOCS1O15524 211 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 CHST10O43529 356 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 SLC37A4O43826 429 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 EIF1BO60739 113 aaKnown RBP2.37□□□□□ -2.03
SPG11-218ENST00000559754 CA11O75493 328 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 GCM2O75603 506 aaPredicted RBP2.37□□□□□ -2.03
SPG11-218ENST00000559754 GATBO75879 557 aaKnown RBP2.37□□□□□ -2.03
SPG11-218ENST00000559754 EPPINO95925 133 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 IGHV3-11P01762 117 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 TCRBP04435 133 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 HIST1H1EP10412 219 aaKnown RBP2.37□□□□□ -2.03
SPG11-218ENST00000559754 MYL12AP19105 171 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 CFL1P23528 166 aaKnown RBP2.37□□□□□ -2.03
SPG11-218ENST00000559754 RPS12P25398 132 aaKnown RBP2.37□□□□□ -2.03
SPG11-218ENST00000559754 ELK4P28324 431 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 PYCR1P32322 319 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 EIF1P41567 113 aaKnown RBP2.37□□□□□ -2.03
SPG11-218ENST00000559754 CBX5P45973 191 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 CAPZBP47756 277 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 CXCR4P61073 352 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 AESQ08117 197 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 SMAGPQ0VAQ4 97 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 SRSF6Q13247 344 aaKnown RBP2.37□□□□□ -2.03
SPG11-218ENST00000559754 PAFAH1B3Q15102 231 aaKnown RBP2.37□□□□□ -2.03
SPG11-218ENST00000559754 XKRXQ6PP77 449 aa2.37□□□□□ -2.03
SPG11-218ENST00000559754 RIMKLAQ8IXN7 391 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms