RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SCN1BQ07699 218 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 GRK1Q15835 563 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 TAF9Q16594 264 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 CTF1Q16619 201 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 SFXN4Q6P4A7 337 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 BTNL3Q6UXE8 466 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 Q71RC1 249 aaPredicted RBP17.92■□□□□ 0.46
SNX1-206ENST00000559389 LY6G5BQ8NDX9 201 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 PPP1R35Q8TAP8 253 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 CHST6Q9GZX3 395 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 PPA2Q9H2U2 334 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 LIN7BQ9HAP6 207 aa17.92■□□□□ 0.46
SNX1-206ENST00000559389 KIR2DS1A0A191URI9 304 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 J3QLI3 93 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 MGST3O14880 152 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 IL1AP01583 271 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 CSN2P05814 226 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 SLC2A2P11168 524 aaPredicted RBP17.91■□□□□ 0.46
SNX1-206ENST00000559389 VBP1P61758 197 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 RPS27AP62979 156 aaKnown RBP17.91■□□□□ 0.46
SNX1-206ENST00000559389 OR5D13Q8NGL4 314 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 TM2D1Q9BX74 207 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 TMPRSS13Q9BYE2 586 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 C19orf12Q9NSK7 152 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 TMEM160Q9NX00 188 aa17.91■□□□□ 0.46
SNX1-206ENST00000559389 RCC2Q9P258 522 aaKnown RBP17.91■□□□□ 0.46
SNX1-206ENST00000559389 A0A0B4J203 849 aa17.9■□□□□ 0.46
SNX1-206ENST00000559389 EDDM3AQ14507 147 aa17.9■□□□□ 0.46
SNX1-206ENST00000559389 CR1LQ2VPA4 569 aa17.9■□□□□ 0.46
SNX1-206ENST00000559389 PAN3Q58A45 887 aaKnown RBP17.9■□□□□ 0.46
SNX1-206ENST00000559389 GDPD3Q7L5L3 318 aa17.9■□□□□ 0.46
SNX1-206ENST00000559389 POM121Q96HA1 1249 aa17.9■□□□□ 0.46
SNX1-206ENST00000559389 DMRTB1Q96MA1 342 aa17.9■□□□□ 0.46
SNX1-206ENST00000559389 DAPK2Q9UIK4 370 aa17.9■□□□□ 0.46
SNX1-206ENST00000559389 ARHGAP32A7KAX9 2087 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 TMEM272A0A1B0GTI8 110 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 HSPB6O14558 160 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 LIPFP07098 398 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 SERPINB10P48595 397 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 PAX8Q06710 450 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 C2orf76Q3KRA6 126 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 SUMF2Q8NBJ7 301 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 LPAR5Q9H1C0 372 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 SPACA1Q9HBV2 294 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 DOCK11Q5JSL3 2073 aa17.89■□□□□ 0.45
SNX1-206ENST00000559389 PPIAL4GP0DN37 164 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 ERP29P30040 261 aaKnown RBP17.88■□□□□ 0.45
SNX1-206ENST00000559389 RPS19P39019 145 aaKnown RBP17.88■□□□□ 0.45
SNX1-206ENST00000559389 P2RX3P56373 397 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 EDDM3BP56851 147 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 RPL31P62899 125 aaKnown RBP17.88■□□□□ 0.45
SNX1-206ENST00000559389 ATXN7L3Q14CW9 347 aaPredicted RBP17.88■□□□□ 0.45
SNX1-206ENST00000559389 SIGIRRQ6IA17 410 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 FAHD2BQ6P2I3 314 aaPredicted RBP17.88■□□□□ 0.45
SNX1-206ENST00000559389 METAP1DQ6UB28 335 aaPredicted RBP17.88■□□□□ 0.45
SNX1-206ENST00000559389 CLVS1Q8IUQ0 354 aaPredicted RBP17.88■□□□□ 0.45
SNX1-206ENST00000559389 FAM185AQ8N0U4 392 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 OR4M1Q8NGD0 313 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 FAHD2AQ96GK7 314 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 NICN1Q9BSH3 213 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 MRI1Q9BV20 369 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 DPCDQ9BVM2 203 aaPredicted RBP17.88■□□□□ 0.45
SNX1-206ENST00000559389 OPN4Q9UHM6 478 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 CSPG4Q6UVK1 2322 aa17.88■□□□□ 0.45
SNX1-206ENST00000559389 ZANQ9Y493 2812 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 A0A1W2PQ09 198 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 TMEM127O75204 238 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 KCNJ3P48549 501 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 PAX5Q02548 391 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 PLA2G7Q13093 441 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 ATAD3CQ5T2N8 411 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 TCF23Q7RTU1 214 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 KIR3DL3Q8N743 410 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 RAB2BQ8WUD1 216 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 COQ2Q96H96 371 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 BCL7BQ9BQE9 202 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 URM1Q9BTM9 101 aaKnown RBP17.87■□□□□ 0.45
SNX1-206ENST00000559389 C7orf69Q9H7B7 122 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 LPAR3Q9UBY5 353 aa17.87■□□□□ 0.45
SNX1-206ENST00000559389 A0A0A6YYD4 124 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 PDCD6O75340 191 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 AVPP01185 164 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 SNRPBP14678 240 aaKnown RBP17.86■□□□□ 0.45
SNX1-206ENST00000559389 RAB6AP20340 208 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 TMBIM6P55061 237 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 ZNF273Q14593 569 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 FAM120AOSQ5T036 256 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 RAB12Q6IQ22 244 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 CROCCP3Q8IVE0 287 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 TPRX1Q8N7U7 411 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 PLPPR1Q8TBJ4 325 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 LGALS14Q8TCE9 139 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 SLC25A46Q96AG3 418 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 RAB22AQ9UL26 194 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 AUP1Q9Y679 476 aa17.86■□□□□ 0.45
SNX1-206ENST00000559389 FUOMA2VDF0 154 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 INAFM1C9JVW0 142 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 H3BUI4 141 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 MMP9P14780 707 aa17.85■□□□□ 0.45
SNX1-206ENST00000559389 CHATP28329 748 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms