RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ZNF69Q9UC07 566 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 ST3GAL6Q9Y274 331 aa9.38□□□□□ -0.91
SNX1-204ENST00000559061 KIAA2026Q5HYC2 2103 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 TRBV23-1A0A0A0MS06 115 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 A0A0B4J203 849 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 TRAV40A0A0B4J280 105 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 CENPVL3A0A0U1RRI6 287 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 MEGF11A6BM72 1044 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 FOXI3A8MTJ6 420 aaPredicted RBP9.37□□□□□ -0.91
SNX1-204ENST00000559061 RNASEK-C17orf49H0YIS7 233 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 SLC17A2O00624 439 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 HSPB6O14558 160 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 MMP23AO75900 390 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 ARL6IP5O75915 188 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 CSN2P05814 226 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 CLEC2LP0C7M8 214 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 MGMTP16455 207 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 CD36P16671 472 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 SRD5A1P18405 259 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 GDNFP39905 211 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 GLIPR1P48060 266 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 CAPZA1P52907 286 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 RPL31P62899 125 aaKnown RBP9.37□□□□□ -0.91
SNX1-204ENST00000559061 EDDM3AQ14507 147 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 ATXN7L3Q14CW9 347 aaPredicted RBP9.37□□□□□ -0.91
SNX1-204ENST00000559061 GRK1Q15835 563 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 TAF9Q16594 264 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 RSBN1Q5VWQ0 802 aaPredicted RBP9.37□□□□□ -0.91
SNX1-204ENST00000559061 BRICD5Q6PL45 260 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 BTNL3Q6UXE8 466 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 BAIAP2L2Q6UXY1 529 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 Q6ZPA2 131 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 VMO1Q7Z5L0 202 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 FAM185AQ8N0U4 392 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 PNKDQ8N490 385 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 KIR3DL3Q8N743 410 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 PNLDC1Q8NA58 520 aaKnown RBP9.37□□□□□ -0.91
SNX1-204ENST00000559061 FAM46BQ96A09 425 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 AJUBAQ96IF1 538 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 PCGF1Q9BSM1 259 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 MRI1Q9BV20 369 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 SIRT7Q9NRC8 400 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 KPTNQ9Y664 436 aa9.37□□□□□ -0.91
SNX1-204ENST00000559061 MDFIC2A0A1B0GVS7 189 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 SH2D1BO14796 132 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 MGST3O14880 152 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 DEGS1O15121 323 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 TOX4O94842 621 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 LIPFP07098 398 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 CGB3P0DN86 165 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 CGB7P0DN87 165 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 ZNF44P15621 663 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 EPHA1P21709 976 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 GABRR1P24046 479 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 HTR2CP28335 458 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 ERP29P30040 261 aaKnown RBP9.36□□□□□ -0.91
SNX1-204ENST00000559061 ALDH3B2P48448 385 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 BMXP51813 675 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 P2RX3P56373 397 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 PAX5Q02548 391 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 SCN1BQ07699 218 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 AESQ08117 197 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 GLT8D1Q68CQ7 371 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 BRD3OSQ6XYD6 125 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 SLC16A12Q6ZSM3 486 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 BPIFB2Q8N4F0 458 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 SUMF2Q8NBJ7 301 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 CHST4Q8NCG5 386 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 OR6M1Q8NGM8 313 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 OR13F1Q8NGS4 319 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 C22orf15Q8WYQ4 148 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 DYRK2Q92630 601 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 DMRTB1Q96MA1 342 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 CHCHD6Q9BRQ6 235 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 NICN1Q9BSH3 213 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 UNKLQ9H9P5 680 aaKnown RBP9.36□□□□□ -0.91
SNX1-204ENST00000559061 ONECUT1Q9UBC0 465 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 FBN1P35555 2871 aaKnown RBP9.36□□□□□ -0.91
SNX1-204ENST00000559061 JMJD1CQ15652 2540 aa9.36□□□□□ -0.91
SNX1-204ENST00000559061 C17orf98A8MV24 154 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 M0R1W7 72 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 TFAP2AP05549 437 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 SLC2A2P11168 524 aaPredicted RBP9.35□□□□□ -0.91
SNX1-204ENST00000559061 GTF2F2P13984 249 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 EFNB2P52799 333 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 EDDM3BP56851 147 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 RIPPLY3P57055 190 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 RPS27AP62979 156 aaKnown RBP9.35□□□□□ -0.91
SNX1-204ENST00000559061 MPV17LQ2QL34 196 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 LDLRAD2Q5SZI1 272 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 HES5Q5TA89 166 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 FIP1L1Q6UN15 594 aaKnown RBP9.35□□□□□ -0.91
SNX1-204ENST00000559061 C9orf139Q6ZV77 190 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 PDZD9Q8IXQ8 264 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 NANPQ8TBE9 248 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 FOXRED1Q96CU9 486 aaPredicted RBP9.35□□□□□ -0.91
SNX1-204ENST00000559061 SLC6A7Q99884 636 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 DPCDQ9BVM2 203 aaPredicted RBP9.35□□□□□ -0.91
SNX1-204ENST00000559061 TM2D1Q9BX74 207 aa9.35□□□□□ -0.91
SNX1-204ENST00000559061 SELENOIQ9C0D9 397 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms