RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 FUOMA2VDF0 154 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 ZNF44P15621 663 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 RAB3AP20336 220 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 CD34P28906 385 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 GLIPR1P48060 266 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 AESQ08117 197 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 DYNC1I2Q13409 638 aaKnown RBP13.7□□□□□ -0.22
LRRC28-210ENST00000558879 C2orf68Q2NKX9 166 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 OR2G6Q5TZ20 316 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 RPL22L1Q6P5R6 122 aaKnown RBP13.7□□□□□ -0.22
LRRC28-210ENST00000558879 BAIAP2L2Q6UXY1 529 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 HEPN1Q6WQI6 88 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 KLHDC1Q8N7A1 406 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 PACRGLQ8N7B6 248 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 Q8NFD4 153 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 OR51T1Q8NGJ9 327 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 CPNE2Q96FN4 548 aaPredicted RBP13.7□□□□□ -0.22
LRRC28-210ENST00000558879 C8orf4Q9NR00 106 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 TAS2R4Q9NYW5 299 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 PITPNC1Q9UKF7 332 aa13.7□□□□□ -0.22
LRRC28-210ENST00000558879 DIMT1Q9UNQ2 313 aaKnown RBP13.7□□□□□ -0.22
LRRC28-210ENST00000558879 IRGMA1A4Y4 181 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 LALBAP00709 142 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 TMEM225BP0DP42 221 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 JUNBP17275 347 aaPredicted RBP13.69□□□□□ -0.22
LRRC28-210ENST00000558879 GDNFP39905 211 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 RAB13P51153 203 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 PAX5Q02548 391 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 IL13RA2Q14627 380 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 ATXN7L3Q14CW9 347 aaPredicted RBP13.69□□□□□ -0.22
LRRC28-210ENST00000558879 PRAMEF5Q5TYX0 476 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 OR52W1Q6IF63 320 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 DTX3Q8N9I9 347 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 GPR148Q8TDV2 347 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 TMEM106AQ96A25 262 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 SMIM19Q96E16 107 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 PPIL3Q9H2H8 161 aaKnown RBP13.69□□□□□ -0.22
LRRC28-210ENST00000558879 ABCB10Q9NRK6 738 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 SERTAD4Q9NUC0 356 aa13.69□□□□□ -0.22
LRRC28-210ENST00000558879 SIRT4Q9Y6E7 314 aaPredicted RBP13.69□□□□□ -0.22
LRRC28-210ENST00000558879 A0A087X0M5 115 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 A0A1B0GX30 115 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 FAM90A22PA8MWA6 464 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 OGG1O15527 345 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 IGLV1-47P01700 117 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 CDK2P24941 298 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 HTR1DP28221 377 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 SOX2P48431 317 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 ADARB1P78563 741 aaKnown RBP13.68□□□□□ -0.22
LRRC28-210ENST00000558879 C17orf58Q2M2W7 97 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 KRBOX4Q5JUW0 171 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 TTC23Q5W5X9 447 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 ASCL4Q6XD76 172 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 TMPRSS11AQ6ZMR5 421 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 RTN4RL2Q86UN3 420 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 TMEM219Q86XT9 240 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 ZNF485Q8NCK3 441 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 SETD9Q8NE22 299 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 WIPF2Q8TF74 440 aaPredicted RBP13.68□□□□□ -0.22
LRRC28-210ENST00000558879 FOXJ3Q9UPW0 622 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 EXOSC1Q9Y3B2 195 aaKnown RBP13.68□□□□□ -0.22
LRRC28-210ENST00000558879 HILPDAQ9Y5L2 63 aa13.68□□□□□ -0.22
LRRC28-210ENST00000558879 ZNF729A6NN14 1252 aaPredicted RBP13.67□□□□□ -0.22
LRRC28-210ENST00000558879 H0YJX3 145 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 F2RL2O00254 374 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 ALDOBP05062 364 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 CD2P06729 351 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 CGB3P0DN86 165 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 CGB7P0DN87 165 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 PTGFRP43088 359 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 DEFA6Q01524 100 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 BDH1Q02338 343 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 HABP2Q14520 560 aaPredicted RBP13.67□□□□□ -0.22
LRRC28-210ENST00000558879 LRRC36Q1X8D7 754 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 Q6ZTK2 550 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 OR52N1Q8NH53 320 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 NDNFQ8TB73 568 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 ZNF596Q8TC21 504 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 TNFAIP8L1Q8WVP5 186 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 NKX3-1Q99801 234 aaPredicted RBP13.67□□□□□ -0.22
LRRC28-210ENST00000558879 NCOR1P1Q9H4R4 102 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 ZNF286AQ9HBT8 521 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 IL36GQ9NZH8 169 aa13.67□□□□□ -0.22
LRRC28-210ENST00000558879 TRAV24A0A0B4J272 114 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 TRBV5-5A0A0J9YX44 114 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 DEGS1O15121 323 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 MAGEB3O15480 346 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 IGFBP3P17936 291 aaPredicted RBP13.66□□□□□ -0.22
LRRC28-210ENST00000558879 MYL12AP19105 171 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 OR3A4PP47883 348 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 SLC34A1Q06495 639 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 SCN1BQ07699 218 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 RCN1Q15293 331 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 HLA-DRB5Q30154 266 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 NHLRC3Q5JS37 347 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 DMKNQ6E0U4 476 aaPredicted RBP13.66□□□□□ -0.22
LRRC28-210ENST00000558879 ABHD12Q8N2K0 398 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 OR13C5Q8NGS8 318 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 CYGBQ8WWM9 190 aa13.66□□□□□ -0.22
LRRC28-210ENST00000558879 PGLYRP3Q96LB9 341 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms