RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 SOX2P48431 317 aa12.53□□□□□ -0.4
CSHL1-208ENST00000558609 MINOS1Q5TGZ0 78 aa12.53□□□□□ -0.4
CSHL1-208ENST00000558609 ASPHD2Q6ICH7 369 aa12.53□□□□□ -0.4
CSHL1-208ENST00000558609 TRAPPC6BQ86SZ2 158 aa12.53□□□□□ -0.4
CSHL1-208ENST00000558609 OR51A2Q8NGJ7 313 aa12.53□□□□□ -0.4
CSHL1-208ENST00000558609 TMEM80Q96HE8 168 aa12.53□□□□□ -0.4
CSHL1-208ENST00000558609 TMEM133Q9H2Q1 129 aa12.53□□□□□ -0.4
CSHL1-208ENST00000558609 RANBP3Q9H6Z4 567 aaPredicted RBP12.53□□□□□ -0.4
CSHL1-208ENST00000558609 TAS2R3Q9NYW6 316 aa12.53□□□□□ -0.4
CSHL1-208ENST00000558609 SIRT4Q9Y6E7 314 aaPredicted RBP12.53□□□□□ -0.4
CSHL1-208ENST00000558609 MINOS1-NBL1R4GNA1 71 aa12.53□□□□□ -0.4
CSHL1-208ENST00000558609 VWFP04275 2813 aa12.52□□□□□ -0.4
CSHL1-208ENST00000558609 KIAA2026Q5HYC2 2103 aa12.52□□□□□ -0.4
CSHL1-208ENST00000558609 TRGV10A0A0A0MS01 117 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 IGHV2-26A0A0B4J1V2 119 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 MEGF11A6BM72 1044 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 M0QZ24 198 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 DEGS1O15121 323 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 GLIPR1P48060 266 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 DYNLT3P51808 116 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 SCN1BQ07699 218 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 AESQ08117 197 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 DYNC1I2Q13409 638 aaKnown RBP12.52□□□□□ -0.41
CSHL1-208ENST00000558609 MED21Q13503 144 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 SSX2Q16385 188 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 ASCL4Q6XD76 172 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 Q8NFD4 153 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 OR52N1Q8NH53 320 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 GGHQ92820 318 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 TMEM106AQ96A25 262 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 SMIM19Q96E16 107 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 CLEC7AQ9BXN2 247 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 GAL3ST2Q9H3Q3 398 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 TCF7L1Q9HCS4 588 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 TAS2R4Q9NYW5 299 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 CLEC2DQ9UHP7 191 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 ZNF281Q9Y2X9 895 aa12.52□□□□□ -0.41
CSHL1-208ENST00000558609 GABRPO00591 440 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 CASQ2O14958 399 aaPredicted RBP12.51□□□□□ -0.41
CSHL1-208ENST00000558609 CHST1O43916 411 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 MMP23AO75900 390 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 LALBAP00709 142 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 RAB13P51153 203 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 FAM189A2Q15884 450 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
CSHL1-208ENST00000558609 OR52W1Q6IF63 320 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 C11orf88Q6PI97 169 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 HEPN1Q6WQI6 88 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 SATL1Q86VE3 508 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 DTX3Q8N9I9 347 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 ZNF485Q8NCK3 441 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 OR51T1Q8NGJ9 327 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 TNFAIP8L1Q8WVP5 186 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 NRG4Q8WWG1 115 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 COQ2Q96H96 371 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 GPER1Q99527 375 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 CHCHD3Q9NX63 227 aaKnown RBP12.51□□□□□ -0.41
CSHL1-208ENST00000558609 TCF19Q9Y242 345 aa12.51□□□□□ -0.41
CSHL1-208ENST00000558609 TRBV5-5A0A0J9YX44 114 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 ODAMA1E959 279 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 A6NDX4 124 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 EFCAB10A6NFE3 127 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 H0YJX3 145 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 CAPGP40121 348 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 EFNB2P52799 333 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 DEFA6Q01524 100 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 ST3GAL4Q11206 333 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 PLA1AQ53H76 456 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 KRBOX4Q5JUW0 171 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 DMKNQ6E0U4 476 aaPredicted RBP12.5□□□□□ -0.41
CSHL1-208ENST00000558609 RTN4RL2Q86UN3 420 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 C8orf59Q8N0T1 100 aaPredicted RBP12.5□□□□□ -0.41
CSHL1-208ENST00000558609 ABHD12Q8N2K0 398 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 FBLIM1Q8WUP2 373 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 GHSRQ92847 366 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 NR1H4Q96RI1 486 aaPredicted RBP12.5□□□□□ -0.41
CSHL1-208ENST00000558609 NCOR1P1Q9H4R4 102 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 TMEM138Q9NPI0 162 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 ABCB10Q9NRK6 738 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 CNOT2Q9NZN8 540 aaKnown RBP12.5□□□□□ -0.41
CSHL1-208ENST00000558609 PITPNC1Q9UKF7 332 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 SIGLEC9Q9Y336 463 aa12.5□□□□□ -0.41
CSHL1-208ENST00000558609 TRAV24A0A0B4J272 114 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 GPX5O75715 221 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 GNAO1P09471 354 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 IGFBP3P17936 291 aaPredicted RBP12.49□□□□□ -0.41
CSHL1-208ENST00000558609 CDK2P24941 298 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 HTR1DP28221 377 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 CD34P28906 385 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 PTGFRP43088 359 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 PPP3R1P63098 170 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 IL13RA2Q14627 380 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 RSU1Q15404 277 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 PRAMEF5Q5TYX0 476 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 LAIR2Q6ISS4 152 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 CCBE1Q6UXH8 406 aaPredicted RBP12.49□□□□□ -0.41
CSHL1-208ENST00000558609 OR4P4Q8NGL7 312 aa12.49□□□□□ -0.41
CSHL1-208ENST00000558609 OR2T6Q8NHC8 308 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms