RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 KCNJ3P48549 501 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 SRSF2Q01130 221 aaKnown RBP6.94□□□□□ -1.3
TPM1-213ENST00000558400 SCN1BQ07699 218 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 TPBGQ13641 420 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 IRF3Q14653 427 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 SLC9A3R2Q15599 337 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 ACSM3Q53FZ2 586 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 NHLRC3Q5JS37 347 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 OR52W1Q6IF63 320 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 CRIP3Q6Q6R5 217 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 UNQ9370/PRO34162Q6UXP9 181 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 C12orf54Q6X4T0 127 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 LINC00596Q86U02 117 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 LDLRAD3Q86YD5 345 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 C11orf42Q8N5U0 333 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.94□□□□□ -1.3
TPM1-213ENST00000558400 NKAIN3Q8N8D7 197 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 ZFP41Q8N8Y5 198 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 OR13D1Q8NGV5 346 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 CORO2AQ92828 525 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 UFD1Q92890 307 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 CNBD2Q96M20 576 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 ZNF714Q96N38 554 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 DERL3Q96Q80 235 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 OR14A2Q96R54 314 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 ZNF184Q99676 751 aaPredicted RBP6.94□□□□□ -1.3
TPM1-213ENST00000558400 UQCC2Q9BRT2 126 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 CCDC90BQ9GZT6 254 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 FAM192AQ9GZU8 254 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 TCF7L1Q9HCS4 588 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 ESM1Q9NQ30 184 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 TAS2R3Q9NYW6 316 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 OR6C3Q9NZP0 311 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 GHRLQ9UBU3 117 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 ING4Q9UNL4 249 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 TRGV10A0A0A0MS01 117 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 PNMA8CA0A1B0GUJ8 204 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 A0A1B0GUS0 222 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 A0A1W2PPK0 400 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 MEIOCA2RUB1 952 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 SIRPB1O00241 398 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 GABRPO00591 440 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 HOXA3O43365 443 aaPredicted RBP6.93□□□□□ -1.3
TPM1-213ENST00000558400 DENRO43583 198 aaKnown RBP6.93□□□□□ -1.3
TPM1-213ENST00000558400 CALCBP10092 127 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 IER3P46695 156 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 OR3A1P47881 315 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 SNU13P55769 128 aaKnown RBP6.93□□□□□ -1.3
TPM1-213ENST00000558400 P2RX3P56373 397 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 EDDM3AQ14507 147 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 AANATQ16613 207 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 RUSC1-AS1Q66K80 236 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 GLT8D1Q68CQ7 371 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 ASPHD2Q6ICH7 369 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 Q6P435 159 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 RNF144BQ7Z419 303 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 PDZD9Q8IXQ8 264 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 OSR2Q8N2R0 312 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 JAGN1Q8N5M9 183 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 DTX3Q8N9I9 347 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 OR4S1Q8NGB4 309 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 OR13C5Q8NGS8 318 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 OR5R1Q8NH85 324 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 DYRK2Q92630 601 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 OR5M11Q96RB7 305 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 NR1H4Q96RI1 486 aaPredicted RBP6.93□□□□□ -1.3
TPM1-213ENST00000558400 CHST6Q9GZX3 395 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 SLITRK2Q9H156 845 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 MEGF9Q9H1U4 602 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 GAL3ST2Q9H3Q3 398 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 IFT22Q9H7X7 185 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 SPACA1Q9HBV2 294 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 ST3GAL6Q9Y274 331 aa6.93□□□□□ -1.3
TPM1-213ENST00000558400 LSM2Q9Y333 95 aaKnown RBP6.93□□□□□ -1.3
TPM1-213ENST00000558400 TRAV8-7A0A075B6U6 113 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 A0A0U1RQK1 487 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 POM121CA8CG34 1229 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 SLC33A1O00400 549 aaPredicted RBP6.92□□□□□ -1.3
TPM1-213ENST00000558400 ARL6IP5O75915 188 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 CDRT1O95170 752 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 MAS1P04201 325 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 MELTFP08582 738 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 UBBP0CG47 229 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 HSMCR30P0CW71 290 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 IGHV1-8P0DP01 117 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 CCL3L1P16619 93 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 SRMP19623 302 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 GZMHP20718 246 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 SAA4P35542 130 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 OR3A4PP47883 348 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 PSMD7P51665 324 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 DLX6P56179 175 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 PAX5Q02548 391 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 AESQ08117 197 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 MLLT11Q13015 90 aaPredicted RBP6.92□□□□□ -1.3
TPM1-213ENST00000558400 ZNF273Q14593 569 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 MPV17LQ2QL34 196 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 PAN3Q58A45 887 aaKnown RBP6.92□□□□□ -1.3
TPM1-213ENST00000558400 KRBOX4Q5JUW0 171 aa6.92□□□□□ -1.3
TPM1-213ENST00000558400 GDPGP1Q6ZNW5 385 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms