RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 HBE1P02100 147 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 CXCL1P09341 107 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 RD3LP0DJH9 198 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 EXT1Q16394 746 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 C9orf152Q5JTZ5 239 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 AKR1C8PQ5T2L2 129 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 TMEM42Q69YG0 159 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF343Q6P1L6 599 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 CYB561D1Q8N8Q1 229 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 SMRP1Q8NCR6 262 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 OR1F12Q8NHA8 337 aa10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 RBMXL1Q96E39 390 aaKnown RBP10.22□□□□□ -0.77
VIPAS39-211ENST00000557658 SYNGR3O43761 229 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 FUT3P21217 361 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 FUT6P51993 359 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 PRSS12P56730 875 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 TLE4Q04727 773 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 BAXQ07812 192 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 RAET1LQ5VY80 246 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF774Q6NX45 483 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 SLC25A45Q8N413 288 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 ZNF837Q96EG3 531 aaPredicted RBP10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 JSRP1Q96MG2 331 aaPredicted RBP10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 MAGT1Q9H0U3 335 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 FAM86C1Q9NVL1 165 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 URGCP-MRPS24S4R325 110 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 SZT2Q5T011 3432 aa10.21□□□□□ -0.77
VIPAS39-211ENST00000557658 PROB1E7EW31 1015 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 F10P00742 488 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 MMP9P14780 707 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 GLIPR1P48060 266 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 DYNLT3P51808 116 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 RBM11P57052 281 aaKnown RBP10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 RAB30Q15771 203 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 SPIN3Q5JUX0 258 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 SLC35E3Q7Z769 313 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 TBC1D26Q86UD7 250 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 WDR5BQ86VZ2 330 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 SELENOHQ8IZQ5 122 aaKnown RBP10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF383Q8NA42 475 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 OR13D1Q8NGV5 346 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 GLRX2Q9NS18 164 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF391Q9UJN7 358 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 SPTBN5Q9NRC6 3674 aaKnown RBP10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 ZNF587BE7ETH6 402 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 ADAM20O43506 726 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 CST7O76096 145 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 CST2P09228 141 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 GNRHRP30968 328 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 HAAOP46952 286 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 ERVFRD-1P60508 538 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 DEFA6Q01524 100 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 PDCD1Q15116 288 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 CXorf66Q5JRM2 361 aaPredicted RBP10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 CDCP2Q5VXM1 449 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 SP5Q6BEB4 398 aaPredicted RBP10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 DPPA3Q6W0C5 159 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 GPR137CQ8N3F9 429 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 ZIC4Q8N9L1 334 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 CPNE4Q96A23 557 aaPredicted RBP10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 RARRES3Q9UL19 164 aa10.21□□□□□ -0.78
VIPAS39-211ENST00000557658 KIAA1549Q9HCM3 1950 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 ELOA3CA0A087WX78 387 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 TGIF2-C20orf24A0A0A6YYL0 155 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 DUXBA0A1W2PPF3 345 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 B4DEV8 164 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 PPP1R2P9O14990 202 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 CYB5BO43169 146 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H2BKO60814 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 OR7C1O76099 320 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H2BJP06899 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 CEACAM1P13688 526 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H2BOP23527 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H2BBP33778 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H2BDP58876 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 RPL23AP62750 156 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H2BCP62807 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 NKX6-1P78426 367 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST2H2BEQ16778 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 KHDC3LQ587J8 217 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 PLCXD3Q63HM9 321 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 SPNS3Q6ZMD2 512 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 Q6ZPA2 131 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 CMTM1Q8IZ96 169 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 IL22RA1Q8N6P7 574 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 OR10D4PQ8NGN7 298 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 CLDND2Q8NHS1 167 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H2BHQ93079 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H2BNQ99877 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIST1H2BMQ99879 126 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 SLC7A10Q9NS82 523 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 CEP192Q8TEP8 1941 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 CNTRLQ7Z7A1 2325 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 DSCR4P56555 118 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 TMEM217Q8N7C4 229 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 HIPK2Q9H2X6 1198 aa10.2□□□□□ -0.78
VIPAS39-211ENST00000557658 GFOD1Q9NXC2 390 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms