RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MMP26Q9NRE1 261 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 RAB22AQ9UL26 194 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 SMIM31A0A1B0GVY4 71 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 MEX3AA1L020 520 aaKnown RBP12.65□□□□□ -0.38
NEDD1-213ENST00000557644 B4DSR2 109 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 SOCS1O15524 211 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 CPT2P23786 658 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 KRTAP1-1Q07627 177 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 EDDM3AQ14507 147 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 ATXN7L3Q14CW9 347 aaPredicted RBP12.65□□□□□ -0.38
NEDD1-213ENST00000557644 PAN3Q58A45 887 aaKnown RBP12.65□□□□□ -0.38
NEDD1-213ENST00000557644 LINC00596Q86U02 117 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 LINC01356Q8N9X3 169 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 CHST4Q8NCG5 386 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 H1FXQ92522 213 aaKnown RBP12.65□□□□□ -0.38
NEDD1-213ENST00000557644 A8MXK9 166 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 MSMBP08118 114 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 VEGFCP49767 419 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 NPY4RP50391 375 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 MOGAT2Q3SYC2 334 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 URM1Q9BTM9 101 aaKnown RBP12.65□□□□□ -0.38
NEDD1-213ENST00000557644 DPCDQ9BVM2 203 aaPredicted RBP12.65□□□□□ -0.38
NEDD1-213ENST00000557644 IFT22Q9H7X7 185 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 PEX16Q9Y5Y5 336 aa12.65□□□□□ -0.38
NEDD1-213ENST00000557644 WNK2Q9Y3S1 2297 aa12.65□□□□□ -0.39
NEDD1-213ENST00000557644 FOXH1O75593 365 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 TGFAP01135 160 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-213ENST00000557644 ZNF182P17025 639 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-213ENST00000557644 NKAPLQ5M9Q1 402 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 RAB12Q6IQ22 244 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 FAM89BQ8N5H3 189 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 SLC25A38Q96DW6 304 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 FAM234AQ9H0X4 552 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 ABRACLQ9P1F3 81 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 RCC2Q9P258 522 aaKnown RBP12.64□□□□□ -0.39
NEDD1-213ENST00000557644 LOC105371242A0A075B767 164 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 RAB6AP20340 208 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 BLVRBP30043 206 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-213ENST00000557644 RANBP1P43487 201 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 GZMKP49863 264 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 EDDM3BP56851 147 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 AESQ08117 197 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 C6orf201Q7Z4U5 140 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 DYRK2Q92630 601 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 DCUN1D5Q9BTE7 237 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 C19orf12Q9NSK7 152 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 COMMD3Q9UBI1 195 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A10PA6NDY2 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A18PA6NE21 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A16PA6NEW6 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A20PA6NIJ5 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A8PA6NJQ4 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A7PA6NKC0 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A22PA8MWA6 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A12PA8MX19 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A5PA8MXJ8 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A23PA8MXZ1 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 ZNF701M0R085 212 aaPredicted RBP12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A15PP0C7V4 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A13PP0C7W8 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A14PP0C7W9 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FAM90A24PP0C7X0 464 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FUT3P21217 361 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 TMEM50BP56557 158 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 PAX2Q02962 417 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 CYB5R2Q6BCY4 276 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 GDPD3Q7L5L3 318 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 PLPPR1Q8TBJ4 325 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 PTX4Q96A99 478 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 DGCR14Q96DF8 476 aaKnown RBP12.63□□□□□ -0.39
NEDD1-213ENST00000557644 COQ2Q96H96 371 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 DCTN5Q9BTE1 182 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 ATG5Q9H1Y0 275 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 HIF1ANQ9NWT6 349 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 RHBDL2Q9NX52 303 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
NEDD1-213ENST00000557644 FOXI3A8MTJ6 420 aaPredicted RBP12.63□□□□□ -0.39
NEDD1-213ENST00000557644 MGST3O14880 152 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 PDCD6O75340 191 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 CHATP28329 748 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 OR5D13Q8NGL4 314 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 DACT3Q96B18 629 aaPredicted RBP12.63□□□□□ -0.39
NEDD1-213ENST00000557644 ETV7Q9Y603 341 aa12.63□□□□□ -0.39
NEDD1-213ENST00000557644 UBE2QL1A1L167 161 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 RAB27BO00194 218 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 GLIPR1P48060 266 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 PLAC9Q5JTB6 97 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 SAMD12Q8N8I0 201 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 NEK7Q8TDX7 302 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 TMEM186Q96B77 213 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 KCTD12Q96CX2 325 aaKnown RBP12.62□□□□□ -0.39
NEDD1-213ENST00000557644 ARHGAP5-AS1Q96IT6 56 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 NEDD4LQ96PU5 975 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 SULT4A1Q9BR01 284 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 FAAP24Q9BTP7 215 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 MRI1Q9BV20 369 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 SPACA1Q9HBV2 294 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 NDUFA13Q9P0J0 144 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms