RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 VDAC2P45880 294 aaPredicted RBP4.69□□□□□ -1.66
VPS33B-207ENST00000557470 GABRA2P47869 451 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 CX3CR1P49238 355 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 SLC7A2P52569 658 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 ATP5IP56385 69 aaPredicted RBP4.69□□□□□ -1.66
VPS33B-207ENST00000557470 ERVFRD-1P60508 538 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 ACTR3P61158 418 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 VBP1P61758 197 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 BLCAPP62952 87 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 RIPPLY1Q0D2K3 151 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 TAF13Q15543 124 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 KLHL12Q53G59 568 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 METTL21CQ5VZV1 264 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 STX12Q86Y82 276 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 FAM219AQ8IW50 185 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 C11orf42Q8N5U0 333 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 CYB561A3Q8NBI2 242 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 TMEM185AQ8NFB2 350 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 PROKR2Q8NFJ6 384 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 OR5AU1Q8NGC0 362 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 OR51L1Q8NGJ5 315 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 OR10Z1Q8NGY1 313 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 OR52J3Q8NH60 311 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 TFAP2CQ92754 450 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 SLAMF6Q96DU3 332 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 REEP6Q96HR9 211 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 ELOVL1Q9BW60 279 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 RTL8AQ9BWD3 113 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 PRSS22Q9GZN4 317 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 VCX2Q9H322 139 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 HEXA-AS1Q9H8Q6 139 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 PLGRKTQ9HBL7 147 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 INPP5EQ9NRR6 644 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 NLKQ9UBE8 527 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF222Q9UK12 451 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 DHDHQ9UQ10 334 aa4.69□□□□□ -1.66
VPS33B-207ENST00000557470 TCRBV4S1A1TA0A5B7 111 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 DHRS12A0PJE2 317 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 MFSD2BA6NFX1 497 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF850A8MQ14 1090 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF878C9JN71 531 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 BET1O15155 118 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 SYNGR1O43759 233 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 RHBDL1O75783 438 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 GLCEO94923 617 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 DUS4LO95620 317 aaKnown RBP4.68□□□□□ -1.66
VPS33B-207ENST00000557470 ALDOBP05062 364 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 CHRM2P08172 466 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 PSG2P11465 335 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 VPREB1P12018 145 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 CCL3L1P16619 93 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 ACKR3P25106 362 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 DCTDP32321 178 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 GSSP48637 474 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 RPL31P62899 125 aaKnown RBP4.68□□□□□ -1.66
VPS33B-207ENST00000557470 IL5RAQ01344 420 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 LIPEQ05469 1076 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 FAM76BQ5HYJ3 339 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 LDLRAD2Q5SZI1 272 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF782Q6ZMW2 699 aaPredicted RBP4.68□□□□□ -1.66
VPS33B-207ENST00000557470 IDO2Q6ZQW0 420 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 KCTD8Q6ZWB6 473 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 FAM57BQ71RH2 274 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 RNF144BQ7Z419 303 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 PIGWQ7Z7B1 504 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 AKAP14Q86UN6 197 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 CLVS1Q8IUQ0 354 aaPredicted RBP4.68□□□□□ -1.66
VPS33B-207ENST00000557470 CCDC197Q8NCU1 140 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 CSNK2A3Q8NEV1 391 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 OR5K1Q8NHB7 308 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 RPS4Y2Q8TD47 263 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 HPSE2Q8WWQ2 592 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 OR5P3Q8WZ94 311 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 MYDGFQ969H8 173 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 DGCR14Q96DF8 476 aaKnown RBP4.68□□□□□ -1.66
VPS33B-207ENST00000557470 SDSLQ96GA7 329 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 ASCL2Q99929 193 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 MICU1Q9BPX6 476 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 GPR61Q9BZJ8 451 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 KCNK15Q9H427 330 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 SP140LQ9H930 580 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 NEK6Q9HC98 313 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 KRCC1Q9NPI7 259 aaPredicted RBP4.68□□□□□ -1.66
VPS33B-207ENST00000557470 ABCB10Q9NRK6 738 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 FGFR1OP2Q9NVK5 253 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 DNAJC27Q9NZQ0 273 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF319Q9P2F9 582 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 UBQLN2Q9UHD9 624 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 PITPNC1Q9UKF7 332 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 U3KQK5 164 aa4.68□□□□□ -1.66
VPS33B-207ENST00000557470 TRAV6A0A075B6T7 132 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 SERTM2A0A1B0GWG4 89 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 TMEM210A6NLX4 147 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 ODF3BA8MYP8 253 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 NPIPB11E5RHQ5 1161 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 C3orf84H3BNL1 204 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 PSMD9O00233 223 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 ZNF593O00488 134 aaPredicted RBP4.67□□□□□ -1.66
VPS33B-207ENST00000557470 NME4O00746 187 aa4.67□□□□□ -1.66
VPS33B-207ENST00000557470 ARG1P05089 322 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms